Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3121 |
Symbol | zwf-2 |
ID | 1184778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3506207 |
End bp | 3507739 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394479 |
Product | glucose-6-phosphate 1-dehydrogenase |
Protein accession | NP_792913 |
Protein GI | 28870294 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0364] Glucose-6-phosphate 1-dehydrogenase |
TIGRFAM ID | [TIGR00871] glucose-6-phosphate 1-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.243821 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTCTGT CGCGCGGCAG TGCCGAGCAA AAAGCCGAAG TTGCGCCCCC AACCACCCTG TTTCTGTTCG GTGCACATGG TGACCTGGTC AAGCGTCTGC TGATGCCGGC GCTTTACAAC CTGTCGCGCG ACGGTCTGGT GGATGAAGGG CTGCACATCG TCGGCGTCGA TCACAACGCG ATCAGCGATG CGGACTTCGC CAAAAAACTC GAAAATTTCA TTCGCGACGA GGCCGCCGGC AAAATTGCCG GCGGTGGCAA GGACCCTCTC GATCCTGCGT TGTGGGGCAC GCTGGCCGAG CGTATCAGCT ATGTGCAGGG TGACTTTCTG GATGATTCGA CCTATCAGGA CATCGCCAGC AAGATTGAGA GCACCGGTGC GAAAAACGCG GTGTTTTATC TGGCCACCGC GCCGCGGTTC TTCAGCGAAG TGGCCCAGCG CCTGGGGTCG TCCGGTTTGC TGCAGGAAAC CGATGACGGG TTCCGCCGGG TAATCATCGA AAAGCCGTTC GGCTCCGATC TGGCCAGTGC AGTGGCGCTC AATGGCTGCC TGCTCAAGGT CATGAGCGAA AAACAGATCT ACCGGATCGA CCATTACCTG GGCAAGGAGA CGGTGCAGAA CATTCTGGTC AGCCGTTTCT CCAATGGCCT GTTCGAGTCG TTCTGGAACA ACCACTACAT CGACCACGTG CAGATCACCG CCGCGGAAAC CGTGGGTGTC GAGACCCGTG GCAGTTTTTA CGAGCACACC GGTGCACTGC GCGACATGGT GCCCAATCAC CTGTTCCAGT TGCTGGCGAT GGTCGCGATG GAGCCCCCCG CGGCCTTCGG TGCCGACGCG GTCCGTGGCG AAAAAGCCAA GGTGGTGGGC GCGATCAGGC CGTGGAACAA AGAGGAAGCA CTGGCCAATT CGGTACGCGG TCAGTATGCG CAGGGCACGA TGGGCGACAA GGAGGTTGTC GGTTATCGCC AGGAAGATCG GGTCGAGCCT GACAGTACGA CGGAAACCTA TGTGGCGCTC AAGGTCATGG TCGACAACTG GCGCTGGGTG GGCGTGCCTT TTTATCTGCG CACAGGCAAG CGCATGAGTG CCCGCAGCAC TGAAATCGCC ATCTGCTTCA AACCTGCGCC CTATGCGCAA TTTCGTGACA CCGAAGTCGA TCGTTTGAAG CCCAACTACC TGCGCATCCA GATTCAGCCC AACGAAGGCA TGTGGTTCGA TCTGTTCGCC AAACGGCCCG GCCCGACGCT GGACATGGAG GACATCGCGC TGGGTTTTGC CTATAAGGAC TTCTTCGAGA TGCAGCCTTC GACCGGCTAC GAAACCCTTA TATACGACTG TCTGACCGGC GACCAGACCC TGTTTCAGCG TGCCGACAAC ATCGAAAACG GCTGGCGTGC TCTGCAGCCG TTTCTTGATG CCTGGGCCAG CCAGCCTGAA GTTCAGCCGT ATGAGGCTGG CAAGAACGGA CCTGATGCGG GTGACGAGTT GCTGAGCCGT GATGGTCGCG AGTGGAGAGA TCTGAATGTC TGA
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Protein sequence | MGLSRGSAEQ KAEVAPPTTL FLFGAHGDLV KRLLMPALYN LSRDGLVDEG LHIVGVDHNA ISDADFAKKL ENFIRDEAAG KIAGGGKDPL DPALWGTLAE RISYVQGDFL DDSTYQDIAS KIESTGAKNA VFYLATAPRF FSEVAQRLGS SGLLQETDDG FRRVIIEKPF GSDLASAVAL NGCLLKVMSE KQIYRIDHYL GKETVQNILV SRFSNGLFES FWNNHYIDHV QITAAETVGV ETRGSFYEHT GALRDMVPNH LFQLLAMVAM EPPAAFGADA VRGEKAKVVG AIRPWNKEEA LANSVRGQYA QGTMGDKEVV GYRQEDRVEP DSTTETYVAL KVMVDNWRWV GVPFYLRTGK RMSARSTEIA ICFKPAPYAQ FRDTEVDRLK PNYLRIQIQP NEGMWFDLFA KRPGPTLDME DIALGFAYKD FFEMQPSTGY ETLIYDCLTG DQTLFQRADN IENGWRALQP FLDAWASQPE VQPYEAGKNG PDAGDELLSR DGREWRDLNV
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