Gene Nham_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_3271 
Symbol 
ID4029465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3603910 
End bp3605424 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content62% 
IMG OID637971683 
Productglucose-6-phosphate 1-dehydrogenase 
Protein accessionYP_578465 
Protein GI92118736 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0364] Glucose-6-phosphate 1-dehydrogenase 
TIGRFAM ID[TIGR00871] glucose-6-phosphate 1-dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGGACG CAAGCAACAA GCCGCACAAA CCGGAGCCCT GCTGCTTCGT CATCTTTGGC 
GTCACCGGCG ATCTCACCCA TCGCCTCGTC ATTCCCGCAC TCTACAATCT TGCCGAATCC
GGCCTGCTGC CGGAGCAGTT TTGCATCGTC GGCATCGTCC GCAAGCAGAT GTCGGAAGAT
GATCTCCGGC AAAGCCTGAT GGACGGATTG AACAAGCACG CCACCCGGCC GGTCAAAACG
GAAGTTGCCC AAAAGGTGCT TGGCTGCCTG ACGTGTCTCG AAGCCGATCC GTCCGATCCG
GCCTCGTTCG ATACCTTGAG CAAGGCTTTC GAAAAGCTCG AGACAGCCAA GGGAACCTGC
GGCAACCGCC TGTTCTATCT TGCCGTGCCG CCGACAGCCT TTGCGCCGAT CACCGAACAA
CTCGGCCGGG TCGGCCTGCT GCGCGAGGCC AATGGCGCGT GGCGCAGGCT GGTGGTCGAA
AAACCGTTCG GCACCGATCT GGCGTCGGCA AAAGCGCTCA ATGGCAAGCT GCTCAAGATC
GCCGATGAGC ATCAGATCTA CCGGATCGAT CACTATCTCG GCAAGGAAAC CGTCCAGAAC
ATTCTCGTCC TTCGCTTCGC CAACGGCATG TTCGAGCCGA TCTGGAATCG CAACCACATC
GACCATATCC AGATCACCGT CGACGAAAAG CTGGCGGTGG GACATCGCGG CAGTTTCTAC
GACGCGACCG GAGCGCTGCG GGACATGGTG CCGAATCATC TGTTCCAGTT GCTGTCGCTG
GTGACGATGG AGCCGCCAAC GCGGTTCGAT GCCCGCGCGG TGCGCTCGGA AAAGGCGGAG
GTGCTTGCCG CGATCCAGAC CCAGCGCCCG GAGGAGGCAC TCAGAAACTC CGTACGCGGG
CAATACCACG CCGGTAAAAT CGGCGACCAG GCGGTCGGCG ATTATCGCAA AACCCCCGAC
GTGAAGCCCG ACAGCACCAC CGAAACCTAT GCGGCGCTCA AGCTGACAAT CGACAACTGG
CGATGGGCCG GTGTCCCCTT CTACCTGCGC ACCGGCAAGG CGCTCGGCCT CAAGCGCACC
GAAGTCGCGA TCAAGTTCAA GCAGGCGCCG TTCGCGATGT TTCGCGCCAC GCCCGTTGAT
CAGCTCTCGC AAAACTATCT CGTCATCGGC ATCGAGCCGG CCGAAGGCAT CACGCTGCAA
TTCAACACCA AGGTGCCCGG TCCCACGATT TCGATCGACG GCGTCGAGAT GAAATTCCGC
TACAAGGATT ACTTCAAGGC CGCGCCGAGC ACGGGCTACG AGACGCTGAT CTACGACTGC
ATGATCGGTG ACAACATCCT GTTTCAGCGG GCCGACGGCG TGGAGGCCGG CTGGCAGGCC
GTGCAGCCGT TCCTCGACGC CTGGAAGAAG GCCGGCGCCG ACGGGCTGGT CGGCTACGAG
GCAGGCAGCG AAGGCCCCGC TGAGGCCGAC GCGTTGCTGG CGCGGGATGG CCACAATTGG
CGCAAGCTGA CATGA
 
Protein sequence
MADASNKPHK PEPCCFVIFG VTGDLTHRLV IPALYNLAES GLLPEQFCIV GIVRKQMSED 
DLRQSLMDGL NKHATRPVKT EVAQKVLGCL TCLEADPSDP ASFDTLSKAF EKLETAKGTC
GNRLFYLAVP PTAFAPITEQ LGRVGLLREA NGAWRRLVVE KPFGTDLASA KALNGKLLKI
ADEHQIYRID HYLGKETVQN ILVLRFANGM FEPIWNRNHI DHIQITVDEK LAVGHRGSFY
DATGALRDMV PNHLFQLLSL VTMEPPTRFD ARAVRSEKAE VLAAIQTQRP EEALRNSVRG
QYHAGKIGDQ AVGDYRKTPD VKPDSTTETY AALKLTIDNW RWAGVPFYLR TGKALGLKRT
EVAIKFKQAP FAMFRATPVD QLSQNYLVIG IEPAEGITLQ FNTKVPGPTI SIDGVEMKFR
YKDYFKAAPS TGYETLIYDC MIGDNILFQR ADGVEAGWQA VQPFLDAWKK AGADGLVGYE
AGSEGPAEAD ALLARDGHNW RKLT