13 homologs were found in PanDaTox collection
for query gene Pnuc_1358 on replicon NC_009379
Organism: Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009379  Pnuc_1358  hypothetical protein  100 
 
 
170 aa  345  1e-94  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.250908  n/a   
 
 
-
 
NC_010531  Pnec_0591  hypothetical protein  78.82 
 
 
170 aa  271  3e-72  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1278  hypothetical protein  41.13 
 
 
171 aa  113  2.0000000000000002e-24  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009379  Pnuc_0962  Ion transport 2 domain-containing protein  32.23 
 
 
174 aa  73.9  0.0000000000008  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  0.318129  n/a   
 
 
-
 
NC_010531  Pnec_0679  hypothetical protein  44.68 
 
 
125 aa  67  0.0000000001  Polynucleobacter necessarius subsp. necessarius STIR1  Bacteria  normal  normal 
 
 
-
 
NC_009379  Pnuc_1623  hypothetical protein  36.17 
 
 
159 aa  59.7  0.00000002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_008825  Mpe_A3241  hypothetical protein  30.3 
 
 
143 aa  48.9  0.00003  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
NC_010511  M446_3367  Ion transport 2 domain-containing protein  26.4 
 
 
142 aa  48.5  0.00005  Methylobacterium sp. 4-46  Bacteria  normal  normal 
 
 
-
 
NC_011894  Mnod_2273  Ion transport 2 domain protein  26.9 
 
 
142 aa  48.1  0.00005  Methylobacterium nodulans ORS 2060  Bacteria  normal  n/a   
 
 
-
 
NC_008347  Mmar10_1749  Ion transport 2 domain-containing protein  28.92 
 
 
150 aa  47  0.0001  Maricaulis maris MCS10  Bacteria  normal  normal  0.0607848 
 
 
-
 
NC_009379  Pnuc_0698  hypothetical protein  22.83 
 
 
168 aa  46.6  0.0002  Polynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1  Bacteria  normal  n/a   
 
 
-
 
NC_009621  Smed_5664  Ion transport 2 domain-containing protein  23.26 
 
 
159 aa  44.3  0.0008  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_008044  TM1040_1179  Ion transport 2  22.56 
 
 
147 aa  42.4  0.003  Ruegeria sp. TM1040  Bacteria  hitchhiker  0.00343894  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>