Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | TM1040_1179 |
Symbol | |
ID | 4077788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ruegeria sp. TM1040 |
Kingdom | Bacteria |
Replicon accession | NC_008044 |
Strand | + |
Start bp | 1270013 |
End bp | 1270456 |
Gene Length | 444 bp |
Protein Length | 147 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 638006485 |
Product | Ion transport 2 |
Protein accession | YP_613174 |
Protein GI | 99081020 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00343894 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGA TCCAGCAAAT TTTCTGGGGG GGGCTGTTTC TGTTTGTATG CCTGATCCTC GAGACCATCA TGCTTTTGTG GTGTGCGGAT GCGCTGCGAC GCCATCGCAT CCGCTTTCAA CGTCTCTCGA GTATGGCGCA TCAGACCGGG GTCCTGCTGA TCTCGATCGG GTTCGTGGTC GGAGCGCATA CGGCACAGAT CTGGATCTGG TCCGCGGCGC TGTTGCTCAA GGCGCAGACC TTTGAAACCT GGAACGAGGC GGTCTATTTC TCGGTCGCCA CCTACACAAC GCTGGGCTAT GGCGACATCG TATTGGACGC CGGACACAGG ATTTTTGCGT CTTTTGCGGC CATGACGGGC ATGCTCGCGT TTGGGATAAG CACGGCATTT CTGGTGGCCG TGATGCGGTC CGGGCTGGCA CATGGGCCTT TTCGCGATGA GTAA
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Protein sequence | MTLIQQIFWG GLFLFVCLIL ETIMLLWCAD ALRRHRIRFQ RLSSMAHQTG VLLISIGFVV GAHTAQIWIW SAALLLKAQT FETWNEAVYF SVATYTTLGY GDIVLDAGHR IFASFAAMTG MLAFGISTAF LVAVMRSGLA HGPFRDE
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