Gene TM1040_1179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTM1040_1179 
Symbol 
ID4077788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRuegeria sp. TM1040 
KingdomBacteria 
Replicon accessionNC_008044 
Strand
Start bp1270013 
End bp1270456 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content57% 
IMG OID638006485 
ProductIon transport 2 
Protein accessionYP_613174 
Protein GI99081020 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00343894 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACATTGA TCCAGCAAAT TTTCTGGGGG GGGCTGTTTC TGTTTGTATG CCTGATCCTC 
GAGACCATCA TGCTTTTGTG GTGTGCGGAT GCGCTGCGAC GCCATCGCAT CCGCTTTCAA
CGTCTCTCGA GTATGGCGCA TCAGACCGGG GTCCTGCTGA TCTCGATCGG GTTCGTGGTC
GGAGCGCATA CGGCACAGAT CTGGATCTGG TCCGCGGCGC TGTTGCTCAA GGCGCAGACC
TTTGAAACCT GGAACGAGGC GGTCTATTTC TCGGTCGCCA CCTACACAAC GCTGGGCTAT
GGCGACATCG TATTGGACGC CGGACACAGG ATTTTTGCGT CTTTTGCGGC CATGACGGGC
ATGCTCGCGT TTGGGATAAG CACGGCATTT CTGGTGGCCG TGATGCGGTC CGGGCTGGCA
CATGGGCCTT TTCGCGATGA GTAA
 
Protein sequence
MTLIQQIFWG GLFLFVCLIL ETIMLLWCAD ALRRHRIRFQ RLSSMAHQTG VLLISIGFVV 
GAHTAQIWIW SAALLLKAQT FETWNEAVYF SVATYTTLGY GDIVLDAGHR IFASFAAMTG
MLAFGISTAF LVAVMRSGLA HGPFRDE