Gene Pnuc_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1278 
Symbol 
ID5052778 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand+ 
Start bp1348095 
End bp1348610 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content40% 
IMG OID640471450 
Producthypothetical protein 
Protein accessionYP_001156056 
Protein GI145589459 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTAATCC CTCCAGAATC AATATCTCAG ACAGCCGTAC TGGGTCTCCC CATAATGCCT 
CTGATAGTTG AGGTCTTTTT TGGAATACTG GGCCTCATTC TCGTCCTAAT GTATCACGGT 
GTTGCCATCA ATCACATCAT CATGCGCTTT GAAAAGCAGG CAAATAAACA CTTAAGGCTA 
GGGCGATATA ACTACGTATT TATGCATTTT TATGCTTCCT TTTTCTTTAT CGCCTTAATG 
CATATCTGTG AAATCATCAT TTGGTGTTTT TTTATAACGG GATTGGGCCT CATGGATGAT 
TCTGTTCATG CTTTATTATT TGCGGGCAGC TGCTATACCA CCGTGGGTTT TGTTCCAGAT 
ACACTTCCCA TGGGATGGAA AAGCTTAGCC TTCTTTATTT CTTTTTCAGG TCTATTTTGT 
CTGGCATGGA CAACGTCCGT CATGATTGGC ATGACTAATA CTTATAAAAA CGCATGGAAT 
TTGAAGTACG GCCAAAAAGA CCTTAGTTCT TCTTAA
 
Protein sequence
MLIPPESISQ TAVLGLPIMP LIVEVFFGIL GLILVLMYHG VAINHIIMRF EKQANKHLRL 
GRYNYVFMHF YASFFFIALM HICEIIIWCF FITGLGLMDD SVHALLFAGS CYTTVGFVPD 
TLPMGWKSLA FFISFSGLFC LAWTTSVMIG MTNTYKNAWN LKYGQKDLSS S