Gene Pnuc_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnuc_1358 
Symbol 
ID5053553 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. asymbioticus QLW-P1DMWA-1 
KingdomBacteria 
Replicon accessionNC_009379 
Strand- 
Start bp1430550 
End bp1431062 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content40% 
IMG OID640471530 
Producthypothetical protein 
Protein accessionYP_001156136 
Protein GI145589539 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.250908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCCAA TACCAGTCAC CATCGATTCC TCTTTAGATC TACCGGCCTA CTTTGTCGGG 
GCAGTAATCT TGCTGCTCAT TATGGTTTTT CATGGGCTCA TGCTACTTCA AATAGCGAAG 
CGATATGAGG TAAAAACATT TCTCTATTTG GCTGAAAAGA AATACTCCGC TGTAGCTACC 
TGTTTTTATA TTAGCGTTTT CTGTCTTTTT GTAACCCACA TTAGCGAAAT TCTGATTTGG 
GGAATTTCTA TATACGCGTT AAAACTACTA CCTTCTTTAG GTCAGTCTAT TTTATTTAGC 
GGCAGTACTT ATACCGCGAT GGGCTTTATG GAGGATATTC TTCCGGTTGG CTGGAAGATG 
TTGGCAGTCA TCATTGCTTT TTCAGGAATG TTTGCATTCG CGTGGACTGC ATCAGTCATG 
ATTTCAATGA CGAAAAATTA TCGCCAAGCC TACACTAAGC TGCATATGAA AAAACTCAAT 
ATTGCTTCTG AAGTAATTGA TCGTTTTGAG TGA
 
Protein sequence
MNPIPVTIDS SLDLPAYFVG AVILLLIMVF HGLMLLQIAK RYEVKTFLYL AEKKYSAVAT 
CFYISVFCLF VTHISEILIW GISIYALKLL PSLGQSILFS GSTYTAMGFM EDILPVGWKM 
LAVIIAFSGM FAFAWTASVM ISMTKNYRQA YTKLHMKKLN IASEVIDRFE