11 homologs were found in PanDaTox collection
for query gene Pnap_4115 on replicon NC_008781
Organism: Polaromonas naphthalenivorans CJ2



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_008781  Pnap_4115  hypothetical protein  100 
 
 
110 aa  224  3e-58  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.0256902  normal  0.0893513 
 
 
-
 
NC_007948  Bpro_4907  hypothetical protein  72.48 
 
 
136 aa  159  1e-38  Polaromonas sp. JS666  Bacteria  normal  normal  0.456888 
 
 
-
 
NC_007908  Rfer_4244  hypothetical protein  63.74 
 
 
136 aa  111  4.0000000000000004e-24  Rhodoferax ferrireducens T118  Bacteria  hitchhiker  0.0000183557  n/a   
 
 
-
 
NC_012791  Vapar_5301  hypothetical protein  68.75 
 
 
139 aa  108  2.0000000000000002e-23  Variovorax paradoxus S110  Bacteria  normal  0.476606  n/a   
 
 
-
 
NC_010002  Daci_6058  hypothetical protein  54.74 
 
 
169 aa  101  3e-21  Delftia acidovorans SPH-1  Bacteria  normal  0.163498  normal 
 
 
-
 
NC_008782  Ajs_4142  hypothetical protein  61.25 
 
 
157 aa  101  4e-21  Acidovorax sp. JS42  Bacteria  normal  normal  0.308541 
 
 
-
 
NC_008786  Veis_5014  hypothetical protein  51.85 
 
 
127 aa  99.8  1e-20  Verminephrobacter eiseniae EF01-2  Bacteria  normal  normal 
 
 
-
 
NC_011992  Dtpsy_3544  hypothetical protein  63.51 
 
 
157 aa  100  1e-20  Acidovorax ebreus TPSY  Bacteria  normal  n/a   
 
 
-
 
NC_008752  Aave_4795  hypothetical protein  47.37 
 
 
176 aa  97.8  4e-20  Acidovorax citrulli AAC00-1  Bacteria  normal  normal 
 
 
-
 
NC_010524  Lcho_4387  hypothetical protein  39.19 
 
 
156 aa  57  0.00000009  Leptothrix cholodnii SP-6  Bacteria  n/a    hitchhiker  0.0000465918 
 
 
-
 
NC_008825  Mpe_A3827  ribonuclease P protein component  39.51 
 
 
135 aa  50.1  0.000009  Methylibium petroleiphilum PM1  Bacteria  normal  normal 
 
 
-
 
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