56 homologs were found in PanDaTox collection
for query gene Plav_1854 on replicon NC_009719
Organism: Parvibaculum lavamentivorans DS-1



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009719  Plav_1854  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  100 
 
 
235 aa  468  1.0000000000000001e-131  Parvibaculum lavamentivorans DS-1  Bacteria  normal  0.0977225  normal  0.251212 
 
 
-
 
NC_011901  Tgr7_2625  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  52.91 
 
 
224 aa  221  9.999999999999999e-57  Thioalkalivibrio sp. HL-EbGR7  Bacteria  normal  n/a   
 
 
-
 
NC_009656  PSPA7_3587  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  52.91 
 
 
225 aa  219  3.9999999999999997e-56  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_42720  enolase-phosphatase  52.47 
 
 
225 aa  214  5.9999999999999996e-55  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA0797  HAD superfamily hydrolase  50.88 
 
 
227 aa  212  3.9999999999999995e-54  Methylococcus capsulatus str. Bath  Bacteria  normal  0.0437994  n/a   
 
 
-
 
NC_012560  Avin_23800  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  50.44 
 
 
227 aa  208  7e-53  Azotobacter vinelandii DJ  Bacteria  normal  n/a   
 
 
-
 
NC_009484  Acry_0019  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  53.1 
 
 
232 aa  205  6e-52  Acidiphilium cryptum JF-5  Bacteria  normal  n/a   
 
 
-
 
NC_009832  Spro_0943  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  47.53 
 
 
229 aa  204  1e-51  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_013421  Pecwa_3456  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  52.45 
 
 
229 aa  202  3e-51  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_007492  Pfl01_1726  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  49.51 
 
 
227 aa  201  8e-51  Pseudomonas fluorescens Pf0-1  Bacteria  normal  normal 
 
 
-
 
NC_012912  Dd1591_0886  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  54.68 
 
 
236 aa  201  9e-51  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A3330  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  47.14 
 
 
229 aa  200  1.9999999999999998e-50  Yersinia pestis Angola  Bacteria  normal  normal  0.788555 
 
 
-
 
NC_010465  YPK_3320  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  47.14 
 
 
229 aa  200  1.9999999999999998e-50  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0245  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.22 
 
 
230 aa  199  3e-50  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_3181  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  46.7 
 
 
229 aa  199  3.9999999999999996e-50  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_2047  HAD-superfamily hydrolase  50.25 
 
 
227 aa  198  5e-50  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.0777387  n/a   
 
 
-
 
NC_012880  Dd703_0919  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  51.72 
 
 
230 aa  198  7e-50  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009436  Ent638_1142  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  49.26 
 
 
229 aa  196  2.0000000000000003e-49  Enterobacter sp. 638  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_3302  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  53.43 
 
 
229 aa  195  6e-49  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1857  HAD family 2,3-diketo-5-methylthio-1-phosphopentane phosphatase  49.75 
 
 
227 aa  194  8.000000000000001e-49  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0326852  normal  0.421452 
 
 
-
 
NC_007954  Sden_0077  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.18 
 
 
225 aa  187  1e-46  Shewanella denitrificans OS217  Bacteria  normal  n/a   
 
 
-
 
NC_008700  Sama_0074  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  44.39 
 
 
226 aa  182  3e-45  Shewanella amazonensis SB2B  Bacteria  normal  normal 
 
 
-
 
NC_008740  Maqu_0909  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  51.09 
 
 
230 aa  182  4.0000000000000006e-45  Marinobacter aquaeolei VT8  Bacteria  normal  n/a   
 
 
-
 
NC_011071  Smal_1780  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  49.26 
 
 
231 aa  182  4.0000000000000006e-45  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.269926  normal  0.265772 
 
 
-
 
NC_009052  Sbal_4264  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.84 
 
 
226 aa  182  5.0000000000000004e-45  Shewanella baltica OS155  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_0089  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.33 
 
 
226 aa  182  6e-45  Shewanella sp. ANA-3  Bacteria  normal  normal 
 
 
-
 
NC_009665  Shew185_0085  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.84 
 
 
226 aa  181  9.000000000000001e-45  Shewanella baltica OS185  Bacteria  normal  n/a   
 
 
-
 
NC_008322  Shewmr7_0085  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.33 
 
 
226 aa  181  9.000000000000001e-45  Shewanella sp. MR-7  Bacteria  normal  normal 
 
 
-
 
NC_008321  Shewmr4_0090  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.33 
 
 
226 aa  181  9.000000000000001e-45  Shewanella sp. MR-4  Bacteria  normal  normal 
 
 
-
 
NC_009438  Sputcn32_0069  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.35 
 
 
226 aa  181  1e-44  Shewanella putrefaciens CN-32  Bacteria  normal  n/a   
 
 
-
 
NC_011663  Sbal223_0088  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.35 
 
 
226 aa  181  1e-44  Shewanella baltica OS223  Bacteria  normal  normal 
 
 
-
 
NC_009997  Sbal195_0091  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  43.84 
 
 
226 aa  181  1e-44  Shewanella baltica OS195  Bacteria  normal  normal 
 
 
-
 
NC_011365  Gdia_1413  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  50 
 
 
237 aa  179  4e-44  Gluconacetobacter diazotrophicus PAl 5  Bacteria  normal  normal 
 
 
-
 
NC_004347  SO_0084  HAD-superfamily hydrolase, subfamily IA, variant 1 family protein  43.35 
 
 
226 aa  179  4e-44  Shewanella oneidensis MR-1  Bacteria  n/a    n/a   
 
 
-
 
NC_009831  Ssed_4454  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  40.09 
 
 
225 aa  179  4e-44  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009092  Shew_3771  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.36 
 
 
225 aa  177  1e-43  Shewanella loihica PV-4  Bacteria  normal  0.166559  normal 
 
 
-
 
NC_009901  Spea_4180  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.86 
 
 
226 aa  177  2e-43  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_4855  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  41.18 
 
 
225 aa  173  1.9999999999999998e-42  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_010513  Xfasm12_1412  enolase-phosphatase  45.63 
 
 
232 aa  173  1.9999999999999998e-42  Xylella fastidiosa M12  Bacteria  normal  0.185542  n/a   
 
 
-
 
NC_010577  XfasM23_1345  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  45.63 
 
 
232 aa  174  1.9999999999999998e-42  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00846  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.54 
 
 
232 aa  172  3.9999999999999995e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  hitchhiker  0.00945264  n/a   
 
 
-
 
NC_010717  PXO_06081  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  42.54 
 
 
232 aa  172  3.9999999999999995e-42  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.307515  n/a   
 
 
-
 
NC_007604  Synpcc7942_1994  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  45.19 
 
 
238 aa  168  7e-41  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.567266 
 
 
-
 
NC_008345  Sfri_3966  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  38.46 
 
 
226 aa  167  1e-40  Shewanella frigidimarina NCIMB 400  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_0985  2,3-diketo-5-methylthio-1- phosphopentanephosphat ase  47.37 
 
 
224 aa  164  9e-40  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009720  Xaut_2913  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  44.97 
 
 
221 aa  160  2e-38  Xanthobacter autotrophicus Py2  Bacteria  normal  normal 
 
 
-
 
NC_009485  BBta_2512  putative hydrolase  48.39 
 
 
230 aa  158  6e-38  Bradyrhizobium sp. BTAi1  Bacteria  normal  0.341573  normal 
 
 
-
 
NC_011126  HY04AAS1_1512  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  39.22 
 
 
221 aa  157  1e-37  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  0.317976  n/a   
 
 
-
 
NC_007513  Syncc9902_1846  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  36.28 
 
 
245 aa  148  9e-35  Synechococcus sp. CC9902  Bacteria  normal  n/a   
 
 
-
 
NC_011697  PHATRDRAFT_31147  predicted protein  42.29 
 
 
559 aa  147  1.0000000000000001e-34  Phaeodactylum tricornutum CCAP 1055/1  Eukaryota  normal  0.0700452  n/a   
 
 
-
 
NC_007516  Syncc9605_0489  2,3-diketo-5-methylthio-1-phosphopentane phosphatase  34.86 
 
 
250 aa  138  7.999999999999999e-32  Synechococcus sp. CC9605  Bacteria  normal  0.226131  normal  0.360579 
 
 
-
 
NC_008820  P9303_21781  putative enolase-phosphatase E-1  35.41 
 
 
240 aa  133  1.9999999999999998e-30  Prochlorococcus marinus str. MIT 9303  Bacteria  n/a    normal  0.0917092 
 
 
-
 
NC_009043  PICST_44113  predicted protein  38.12 
 
 
241 aa  127  2.0000000000000002e-28  Scheffersomyces stipitis CBS 6054  Eukaryota  normal  normal 
 
 
-
 
NC_013889  TK90_1789  enolase-phosphatase  28.79 
 
 
231 aa  79.3  0.00000000000004  Thioalkalivibrio sp. K90mix  Bacteria  normal  0.0590429  normal  0.022514 
 
 
-
 
NC_007484  Noc_2439  enolase-phosphatase-like  39.77 
 
 
112 aa  61.6  0.00000001  Nitrosococcus oceani ATCC 19707  Bacteria  normal  0.91308  n/a   
 
 
-
 
NC_010338  Caul_2488  HAD family hydrolase  35.79 
 
 
219 aa  44.7  0.001  Caulobacter sp. K31  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>