| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1854 |
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| Symbol | |
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| ID | 5455932 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 2012963 |
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| End bp | 2013670 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640877433 |
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| Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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| Protein accession | YP_001413128 |
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| Protein GI | 154252304 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4229] Predicted enolase-phosphatase |
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| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.0977225 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.251212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGCTG TTCGCGCCGT CGTCACCGAT ATTGAGGGCA CGACGACGCC CCTCGCCTTT
GTGCATGAGG TGTTGTTTCC CTATGCGCGC GCGCGGCTTG CCGACTTCGT GGCGGCGAAT
GCCGATGACG AGGAAGTGGC CGCGGCGCTT GGCGATGCGC GCGAATTGGG CGGCATTGCA
GGGGCCGGCG ATGCGGAGAC GCTCCAGCTT CTGCTGGCAT GGATGGATGA AGACCGGAAG
GCCGGACCGC TGAAGCTGCT GCAGGGGCTG ATCTGGCGGC ATGGCTATGA AGAGGGCGTG
CTGAAGGGCG AGATCTATGC CGATGCGGCG GCGGCGCTGC GGCTCTGGCA CGGCAGAGGC
CTGCGGCTGT TCGTCTATTC CTCGGGATCG GAAGCCGCGC AGCGGCTGAT CTTCGGCCAT
TCGGACCAGG GCGATCTCGG CCCTTGTTTT GAAGGTTATT TCGATACGCG GATCGGCGCG
AAAGTCGACA GCGCATCCTA TGCGGCGATC GCGCAGAGTG CCGGCCTGCC GACGCGGGAA
GTGCTCTTTC TTTCGGATCA TGAAGGAGAG ATCAAGGCGG CGCGGGAGGC GGGAATGCAG
GCGGTTACAA TCGACCGCAC CCTTCAGGAA GAGGCGTGGA TGGAAGGGCC AAAGGCCGGA
TCCTTCAGCG CCGTCGAGAG GGCGCTGGCG CCGGGCAAGA GCGCATAA
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| Protein sequence | MTAVRAVVTD IEGTTTPLAF VHEVLFPYAR ARLADFVAAN ADDEEVAAAL GDARELGGIA
GAGDAETLQL LLAWMDEDRK AGPLKLLQGL IWRHGYEEGV LKGEIYADAA AALRLWHGRG
LRLFVYSSGS EAAQRLIFGH SDQGDLGPCF EGYFDTRIGA KVDSASYAAI AQSAGLPTRE
VLFLSDHEGE IKAAREAGMQ AVTIDRTLQE EAWMEGPKAG SFSAVERALA PGKSA
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