| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_1412 |
|---|
| Symbol | |
|---|
| ID | 6121275 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Xylella fastidiosa M12 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010513 |
|---|
| Strand | + |
|---|
| Start bp | 1470282 |
|---|
| End bp | 1470980 |
|---|
| Gene Length | 699 bp |
|---|
| Protein Length | 232 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641649409 |
|---|
| Product | enolase-phosphatase |
|---|
| Protein accession | YP_001775965 |
|---|
| Protein GI | 170730532 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG4229] Predicted enolase-phosphatase |
|---|
| TIGRFAM ID | [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.185542 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCATGC CTCAAGCAAT TCTCACGGAT ATTGAAGGAA CCACAAGCAG TCTTTCTTTC
GTCAAAGAAG TGCTGTTTCC TTATGCACGC CGCGCCCTCC CCGACTTTGT CCGCGAACAC
CGTGAACACC CTGACGTGAT GCCTTGGTTA GATCAAGTCG CCAACGAAAC CGGCACAGCA
TTCTCTGAAG AAGCTCTGGT AGCCACCTTG CAAACGTGGA TCGACACGGA TAGTAAGCAC
ACCGCACTCA AAGCATTGCA AGGCATGATC TGGGCATCCG GCTACCAGAA CGGCGATTTC
ACCACCCACC TCTACCCGGA TGCAGTCCAA CGGCTGCGCG CCTGGCATGC GGCCAATGTG
CCGCTGTACG TGTACTCATC CGGCTCGGTA CCGGCACAGC AACTGTTCTT CCGCCACAGT
CATGCAGGCG ATCTGAGCGG ACTGTTCTCA GGTTGGTTCG ATACCAAAAT CGGTGGCAAG
CGTGAGTCCA CCAGCTATCA ACGCATTGCG CAACACATTG GGATTGCGCC CGCCGGGATC
GTATTTCTAT CGGATGTGAT CGAAGAATTA AACGCCGCAG CACAAATCGG ATTGAACACG
GTATTGATTG ATCGCCGTGA CGATTATCCA ACGCCACGTC ATCTCAAAGA CACCGACCGC
CATCTGCATT TGGATAGCTT TGCCCAACTG CCCTTTTAA
|
|---|
| Protein sequence | MSMPQAILTD IEGTTSSLSF VKEVLFPYAR RALPDFVREH REHPDVMPWL DQVANETGTA
FSEEALVATL QTWIDTDSKH TALKALQGMI WASGYQNGDF TTHLYPDAVQ RLRAWHAANV
PLYVYSSGSV PAQQLFFRHS HAGDLSGLFS GWFDTKIGGK RESTSYQRIA QHIGIAPAGI
VFLSDVIEEL NAAAQIGLNT VLIDRRDDYP TPRHLKDTDR HLHLDSFAQL PF
|
|---|
| |