| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PHATRDRAFT_31147 |
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| Symbol | |
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| ID | 7199156 |
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| Type | CDS |
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| Is gene spliced | Yes |
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| Is pseudo gene | No |
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| Organism name | Phaeodactylum tricornutum CCAP 1055/1 |
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| Kingdom | Eukaryota |
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| Replicon accession | NC_011697 |
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| Strand | - |
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| Start bp | 203228 |
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| End bp | 205163 |
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| Gene Length | 1936 bp |
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| Protein Length | 559 aa |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | |
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| Product | predicted protein |
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| Protein accession | XP_002185340 |
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| Protein GI | 219130370 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0700452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GACTGCAAGA GCGGCTACCA GAAAAATTTC CAGACGATTC TCCAGCCTCT CTCTGCTCTC
TCAAGGAAGC ATATTCTTTC AGTGGTTCCA TCATGCTTTC GAACGGCTCG CACCAGAACG
TTTCCGCCTC TGGCGATACG TCAGTACCCG GCCAAGGTTG GTCCAACGGA GCCTTGGCAC
CGCAACTTTT TCCCGTCACG CAGCAAGGCC GACTGCAGTT GTACGGGTCA CAACGTCGCT
GGATTGGCCT TCAATCGGGC TGGACTCGGA TCGGGGCGGG ACAGACGGAA CTTGACGCTG
TTCACTCGCG TTCGCAAGGT ACGGGAATCC TGGATAGGAA CGACGCGGAA CAAGCCCAAG
CCGCACGTAG CTTGATTGCG CAGTTGTGTG AGACCTTCTA CAGACAGGGA TGGGCGACAG
GAACAGGTGG GGGTGTTTCT ATTCGAGTGG GAGGTCCATC GCAGAATCGC CCTTGGAGAG
TGTTTGTGGC CCCCTCGGGG ATTCAAAAGG AAGATATGAT TGGTGACGAC GTCTTTGAAC
TGGATATGGA TCGGAAAGTT ATCGTTCCCC CGAGGACGCC GAATCTAAGA CAGTCGGCCT
GCACCCCGCT CTGGTACGTG GTCTACAAGT ATAGACCAAC CGCAACTTGC GTCATTCACA
CTCATTCAAT GCACGCGCAA ATGGCTACCT TGTTGGATCC GACCGAAACC GCTCAAACTC
TTAACGTTAC CCACCTGGAA ATGCTCAAAG GCGTCGGCAA CCACGCCTAC GACGACGTTC
TCGAGATCCC CATCATCGAC AATCGTCCCT CGGAAGACCA ACTGGCCACG CAGCTGCAAG
CCGCCATTCA GGCGTACCCT AAGAGCAACG CGGTACTCGT GCGTCGTCAC GGTCTCTACG
TTTGGGGCGA TAGCTGGGAG CAGGCCAAAA CGCAATGCGA AAGTTTTGAT TATCTCTTCC
AATCGGCCGT GCAAATGAAA GCCATGGGCA TTGATTCCGG ACTTAAACCA TTGCAAGGGA
CGTATCGCGA AGGCGAGGAC AAGGAGGACC TCGTCGAAAA GACTGTCGAC GAGCCTCCCC
TCAAAAAACT CAAGACGACT GGGTTTCACG GGCTCAAGGC CGCCGACAAC CACCGCGACG
TCGTCGCCAA CGCGGTACCA ATTCTGCCCC GCGATGCGAA GATTTTACTA CTGGACATTG
AAGGATGTAC CACAAGTATT TCCTTTGTCA AGGACCGACT GTTTCCGTAC GTCCGGGAGC
GTTTGGACTC TTATCTGAAA GGGCACGTGG CCGCAAGCGA CAAATATCAG CAGTTGGCTA
AAGCGTTGGC CGGCGAAGCG GATGCCCACA GCGACTCGCC TGTTGCGGGT ACGATTCGAC
AAGACGTCGC TGGGATGGTA CGATACATGA TGGATCGAGA CTTCAAATCT GCTACACTCA
AAGCGCTTCA GGGGGACATT TGGAAGACTG GATACGCTCG CGGTGAGCTG AAGGGACACA
TATACAGCGA CTTTGTTCCT ACTTGTCAAT GGATGCAACG ACACGGCGTC CGTGTCTACA
TTTATTCTTC TGGGTCGGTG GCTGCTCAAA AGCTTTTGTT TGGCAACTCG ACCGAAGGCG
ACTTGTTGCC GTATTTGTCC GGGCACTTTG ACATTCCCAC AGCTGGTCCT AAAAAGGAAG
CAGGGTCGTA CACAGCCATT GCTCAAACGC TCCAAGTCGC ACCTTCCGCC ATTGTGTTTT
GCAGTGACGC AGAAGCCGAG CTCGTTGCCG CACGGGAAGC GGGCATTGGT TATCCTGTCA
TGAGTGTTCG GCCCGGCAAT GTTCCGCTAT CGGCCGAGGG ACGAGAGCTT CCAGCAATCT
ACTCGCTTCT GCAACTTTGT GGAGAGTGAA TATACAATGA TTCTGTCTAG CTATGTATCA
GACAATCACT TTTTTG
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| Protein sequence | MLSNGSHQNV SASGDTSVPG QGWSNGALAP QLFPVTQQGR LQLYGSQRRW IGLQSGWTRI
GAGQTELDAV HSRSQGTGIL DRNDAEQAQA ARSLIAQLCE TFYRQGWATG TGGGVSIRVG
GPSQNRPWRV FVAPSGIQKE DMIGDDVFEL DMDRKVIVPP RTPNLRQSAC TPLWYVVYKY
RPTATCVIHT HSMHAQMATL LDPTETAQTL NVTHLEMLKG VGNHAYDDVL EIPIIDNRPS
EDQLATQLQA AIQAYPKSNA VLVRRHGLYV WGDSWEQAKT QCESFDYLFQ SAVQMKAMGI
DSGLKPLQGT YREGEDKEDL VEKTILLLDI EGCTTSISFV KDRLFPYVRE RLDSYLKGHV
AASDKYQQLA KALAGEADAH SDSPVAGTIR QDVAGMVRYM MDRDFKSATL KALQGDIWKT
GYARGELKGH IYSDFVPTCQ WMQRHGVRVY IYSSGSVAAQ KLLFGNSTEG DLLPYLSGHF
DIPTAGPKKE AGSYTAIAQT LQVAPSAIVF CSDAEAELVA AREAGIGYPV MSVRPGNVPL
SAEGRELPAI YSLLQLCGE
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