Gene Avin_23800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAvin_23800 
Symbol 
ID7761295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAzotobacter vinelandii DJ 
KingdomBacteria 
Replicon accessionNC_012560 
Strand
Start bp2382578 
End bp2383261 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content67% 
IMG OID643805264 
Product2,3-diketo-5-methylthio-1-phosphopentane phosphatase 
Protein accessionYP_002799542 
Protein GI226944469 
COG category[C] Energy production and conversion 
COG ID[COG4229] Predicted enolase-phosphatase 
TIGRFAM ID[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGGTCC GGGCCATTCT CACCGACATC GAAGGCACCA CCAGCGCGGT CAGTTTCGTC 
TTCGACGTAC TCTTCCCCTA TGCCCGTGAG CATCTGCCGG CGTTCGTCCG CCGGCACGCC
GCCGAGGCGG AGGTCGCGAC CCAGCTCGAA GCCGTGCGTG CCGAGAGCGG CGAAGCGGAC
GCCGATATCG AGCGGGTCAT CGAAATCCTC CTCGGTTGGA TCGCCGAGGA TCGCAAGGCC
ACGCCGCTCA AGGCGTTGCA GGGCATGGTC TGGGAGCAGG GCTACCGTGC CAGCGCACTC
AAGGGGCATG TCTATCCGGA TGCCGTGGCC ACCATGCGGC GTTGGAAGCA CGAGGGATAC
CAGCTCTACG TGTATTCCTC CGGCTCGATC CAGGCGCAGC GCCTGATCTT CGGCTGCTCG
GAAGCCGGCG ACCTGTCGCC GCTGTTTTCC GGCTACTTCG ACACCACCAG CGGGCCCAAG
CGCGAAGCGG CGTCCTATGT GCGCATCGCC GAAGCCATCG GCCGGCCGCC GGCGGAGATC
CTGTTCCTTT CCGATGTGCT GCAGGAGCTC GACGCCGCCC GCGCGGCGGG CATGTGCACC
TGTGGCCTGG CGCGCGAGGG AGGGGAGCTG GACGGCCATC CGACCGTGTC CAGCTTTACG
GCGATCGAGC CGGCAGCCTG CTGA
 
Protein sequence
MPVRAILTDI EGTTSAVSFV FDVLFPYARE HLPAFVRRHA AEAEVATQLE AVRAESGEAD 
ADIERVIEIL LGWIAEDRKA TPLKALQGMV WEQGYRASAL KGHVYPDAVA TMRRWKHEGY
QLYVYSSGSI QAQRLIFGCS EAGDLSPLFS GYFDTTSGPK REAASYVRIA EAIGRPPAEI
LFLSDVLQEL DAARAAGMCT CGLAREGGEL DGHPTVSSFT AIEPAAC