Gene PXO_00846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00846 
Symbol 
ID6305992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp2523540 
End bp2524238 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content62% 
IMG OID642639756 
Product2,3-diketo-5-methylthio-1-phosphopentane phosphatase 
Protein accessionYP_001913616 
Protein GI188576687 
COG category[C] Energy production and conversion 
COG ID[COG4229] Predicted enolase-phosphatase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E
[TIGR01691] 2,3-diketo-5-methylthio-1-phosphopentane phosphatase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.00945264 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACACGAC CGCAAGCGAT CCTCACCGAT ATCGAAGGTA CGACCAGCAG CATTTCGTTC 
GTCAAGGACG TGTTGTTCCC GTATGCGCGC CGCGCCATGC CCGCTTACGT GCGCGAGCAC
GGCAATCATC CGCAGGTGCG CCACTGGCTC AACCAGGTGG CCGATGAAAT CGGCGAGGAC
GTGCCGGACG ACGTGCTGAT CACCACGCTG CAGACCTGGA TCGACGAGGA CCGCAAGCAC
ACCGCGCTTA AGGCCTTGCA GGGCTTGATC TGGGGCGAGG GCTACAAGAT TGCCGACTTC
ACCGCGCACA TGTATGCCGA TGCAGCGCTC CAGCTGCAGG CCTGGCACGC AGCGGGCATT
CCGCTGTATG TGTATTCGTC CGGCTCGGTG CCGGCGCAGA AGTTGTTTTT CGCGCATAGC
GATGCCGGCG ATTTGAGCGG CCTGGTGAGC GACTGGTTCG ATACCGAAGT TGGCTCCAAG
CGCGAGGCCG CCAGCTACCG TCGTATTGCC GAGCGCATCG GTGTCCCGGC GTCGGAGATC
CTGTTCCTGT CGGATGTGAT CGAAGAGCTC GATGCGGCCA AACGTACGGG GATGCGCACC
GCGCTGCTGG AACGCCGTGA GGACTACCCC ACGCCGCGCT CGGCCGACGA TGTCGGCAGC
CACCAGCGCG TGGAAAATTT TAGCCAGCTG GTTTTTTGA
 
Protein sequence
MTRPQAILTD IEGTTSSISF VKDVLFPYAR RAMPAYVREH GNHPQVRHWL NQVADEIGED 
VPDDVLITTL QTWIDEDRKH TALKALQGLI WGEGYKIADF TAHMYADAAL QLQAWHAAGI
PLYVYSSGSV PAQKLFFAHS DAGDLSGLVS DWFDTEVGSK REAASYRRIA ERIGVPASEI
LFLSDVIEEL DAAKRTGMRT ALLERREDYP TPRSADDVGS HQRVENFSQL VF