Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pecwa_3456 |
Symbol | |
ID | 8531876 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pectobacterium wasabiae WPP163 |
Kingdom | Bacteria |
Replicon accession | NC_013421 |
Strand | - |
Start bp | 3798369 |
End bp | 3799058 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | |
Product | 2,3-diketo-5-methylthio-1-phosphopentane phosphatase |
Protein accession | YP_003260800 |
Protein GI | 261822694 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAACG CAATTGTGAC AGATATTGAA GGCACCACCA GCGACATCCG TTTTGTTCAC CGCGTGCTGT TTCCCTATGC CCGTGCGCGG CTGGCTGACA CGGTGCGACA GCATGGTAAC GATTCTGAGA TCGCGCAGGC GCTGAACGCC TTACGTCAGG AATTGGCTCA GCCTGATGCG GATAGCGAGA CGTTGATTAC CGCCCTGAAT CAGTTTATGG ATGAAGATCG TAAATCTACG GCGCTGAAGC AGCTACAAGG CATTATCTGG CGCGCGGGCT ATCTTAATGG TGATTTTCAG GGGCATCTGT ACCCCGAAGT GGCAGAACAG CTTTCGGCAT GGCAGCAGCA AGGCCTGCGC CTGTATGTTT ACTCATCAGG CTCGGTGGAA GCGCAGCAAC TGCTGTTCGG TTACAGCAAT GCGGGTGACT TGCGACCGCT GTTTAGCGAC TATTTTGATA CTCGCGTCGG TGCGAAGAGA GAGACGGATT CTTATCGCAC CATTGCGCAC GCCATCGGAC TGCCTGCTGA GCAACTGTTG TTCCTATCGG ATATTCGTCA GGAGTTGGAT GCTGCGCAGG AAGCCGGTTG GCACACCTGC CAGCTTATTC GCGATGATGC GGATAGTGTA AGCCGTCACC GTCAGGTGGC ACGTTTTGAC CAGATCGACT TACCGGAGTA TGCCAAATGA
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Protein sequence | MINAIVTDIE GTTSDIRFVH RVLFPYARAR LADTVRQHGN DSEIAQALNA LRQELAQPDA DSETLITALN QFMDEDRKST ALKQLQGIIW RAGYLNGDFQ GHLYPEVAEQ LSAWQQQGLR LYVYSSGSVE AQQLLFGYSN AGDLRPLFSD YFDTRVGAKR ETDSYRTIAH AIGLPAEQLL FLSDIRQELD AAQEAGWHTC QLIRDDADSV SRHRQVARFD QIDLPEYAK
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