8 homologs were found in PanDaTox collection
for query gene PSPTO_3292 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_3292  type III effector HopAH2-1  100 
 
 		 404 aa  821    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.622578  n/a   
 
 
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NC_004578  PSPTO_3293  type III effector HopAH2-2  62.14 
 
 		 416 aa  489  1e-137  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.819559  n/a   
 
 
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NC_007005  Psyr_3123  type III effector HopAH2  58.91 
 
 		 380 aa  464  1e-129  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.608079  normal  1 
 
 
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NC_004578  PSPTO_0905  type III effector HopAH1  75 
 
 		 422 aa  439  9.999999999999999e-123  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.436525  n/a   
 
 
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NC_007005  Psyr_0779  type III effector HopAH1  75.63 
 
 		 427 aa  441  9.999999999999999e-123  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.487257 
 
 
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NC_003296  RSp0162  endoglucanase precursor (endo-1,4-BETA-glucanase) protein  25.12 
 
 		 420 aa  46.6  0.0008  Ralstonia solanacearum GMI1000  Bacteria  normal  1  normal  1 
 
 
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NC_013595  Sros_0934  putative secreted beta-mannosidase  30.15 
 
 		 523 aa  43.5  0.007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0660492  normal  1 
 
 
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NC_007333  Tfu_0900  mannan endo-1,4-beta-mannosidase  26.11 
 
 		 453 aa  43.1  0.009  Thermobifida fusca YX  Bacteria  normal  0.716591  n/a   
 
 
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