8 homologs were found in PanDaTox collection
for query gene PSPTO_3293 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_3293  type III effector HopAH2-2  100 
 
 		 416 aa  843    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.819559  n/a   
 
 
-
 
NC_007005  Psyr_3123  type III effector HopAH2  67.95 
 
 		 380 aa  565  1e-160  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.608079  normal  1 
 
 
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NC_004578  PSPTO_3292  type III effector HopAH2-1  62.86 
 
 		 404 aa  498  1e-140  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.622578  n/a   
 
 
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NC_004578  PSPTO_0905  type III effector HopAH1  64.29 
 
 		 422 aa  385  1e-106  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.436525  n/a   
 
 
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NC_007005  Psyr_0779  type III effector HopAH1  65.82 
 
 		 427 aa  378  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  1  normal  0.487257 
 
 
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NC_012034  Athe_1866  Mannan endo-1,4-beta-mannosidase., Cellulase  32.38 
 
 		 1414 aa  45.4  0.002  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
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NC_012034  Athe_1865  glycoside hydrolase family 9  32.38 
 
 		 1369 aa  45.1  0.003  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.56874  n/a   
 
 
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NC_012034  Athe_1859  glycoside hydrolase family 5  32.38 
 
 		 1294 aa  44.3  0.004  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
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