12 homologs were found in PanDaTox collection
for query gene Psyr_0779 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_0905  type III effector HopAH1  82.2 
 
 
422 aa  691    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.436525  n/a   
 
 
-
 
NC_007005  Psyr_0779  type III effector HopAH1  100 
 
 
427 aa  855    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.487257 
 
 
-
 
NC_004578  PSPTO_3292  type III effector HopAH2-1  75.63 
 
 
404 aa  442  1e-123  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.622578  n/a   
 
 
-
 
NC_004578  PSPTO_3293  type III effector HopAH2-2  65.82 
 
 
416 aa  378  1e-103  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.819559  n/a   
 
 
-
 
NC_007005  Psyr_3123  type III effector HopAH2  65.2 
 
 
380 aa  375  1e-103  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.608079  normal 
 
 
-
 
NC_007333  Tfu_0900  mannan endo-1,4-beta-mannosidase  28.1 
 
 
453 aa  52  0.00002  Thermobifida fusca YX  Bacteria  normal  0.716591  n/a   
 
 
-
 
NC_012034  Athe_1859  glycoside hydrolase family 5  30.88 
 
 
1294 aa  50.4  0.00006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012034  Athe_1866  Mannan endo-1,4-beta-mannosidase., Cellulase  30.88 
 
 
1414 aa  50.1  0.00007  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_0934  putative secreted beta-mannosidase  27.64 
 
 
523 aa  50.1  0.00008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0660492  normal 
 
 
-
 
NC_012034  Athe_1865  glycoside hydrolase family 9  30.88 
 
 
1369 aa  49.7  0.0001  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.56874  n/a   
 
 
-
 
NC_013530  Xcel_0504  glycoside hydrolase family 5  25.12 
 
 
445 aa  45.4  0.002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014165  Tbis_0925  cellulose-binding family II  23.76 
 
 
460 aa  43.5  0.007  Thermobispora bispora DSM 43833  Bacteria  normal  0.146256  normal 
 
 
-
 
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