Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tfu_0900 |
Symbol | |
ID | 3579454 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermobifida fusca YX |
Kingdom | Bacteria |
Replicon accession | NC_007333 |
Strand | + |
Start bp | 1061243 |
End bp | 1062604 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 637684595 |
Product | mannan endo-1,4-beta-mannosidase |
Protein accession | YP_288961 |
Protein GI | 72161304 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.716591 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAC GTCTCGCGGT CGCCGCAGCA ACCGTCCTTG CGCTGCTGGC GTCCGTCTTT GCCCTCACGC AGCCGGCGAA CGCGGCCACC GGGCTCCACG TCAAGAACGG CCGCCTGTAT GAGGCCAACG GCCAGGAGTT CATCATCCGT GGCGTCAGCC ACCCCCACAA CTGGTACCCC CAGCACACCC AGGCGTTCGC CGACATCAAG TCGCACGGCG CCAACACCGT CCGGGTGGTG CTGAGCAACG GTGTCCGGTG GAGCAAGAAC GGTCCTTCTG ACGTCGCCAA CGTCATCTCC CTGTGCAAGC AGAACCGCCT TATCTGCATG CTGGAGGTGC ACGACACCAC CGGCTACGGC GAGCAGAGCG GGGCCTCCAC GCTCGACCAG GCCGTCGACT ACTGGATCGA GCTGAAGAGC GTGCTCCAGG GCGAGGAGGA CTATGTCCTC ATCAACATCG GCAACGAGCC CTACGGCAAC GACTCCGCGA CCGTCGCCCG CTGGGCGTCG GACACCTCCG CCGCCATCCA GCGGCTGCGC GCCGCCGGAT TCGAGCACAC CCTCGTGGTG GACGCCCCCA ACTGGGGCCA GGACTGGACG AACACCATGC GGAACAACGC CGACCAGGTG TACGCCAGCG ACCCCACCGG CAACACCGTC TTCTCGATCC ACATGTACGG CGTCTACTCC CAGGCGTCCA CGATCACCAG CTACCTGGAG CACTTCGTCA ACGCGGGCCT GCCGCTCATC ATCGGCGAGT TCGGCCACGA CCACTCCGAC GGCAACCCCG ACGAGGACAC GATCATGGCC GAGGCCGAGC GGCTCAAGCT GGGCTACATC GGCTGGTCGT GGAGCGGCAA CGGCGGCGGG GTCGAGTACC TCGACATGGT GTACAACTTC GACGGCGACA ACCTGAGCCC GTGGGGCGAG CGGATCTTCT ACGGCCCTAA CGGTATTGCG AGCACGGCCA AGGAGGCCAC GATCTTCGGC GGCTCCCAGC CGGGCCCGAC CGAGGAGCCG ACGGAAGAGC CGACCGAGGA GCCGACTCCG ACTCCGCCTC CCGCGGAGGG CGACTGCACC GCCACCTACG CCACCATCGG CAGCTGGGGC GGCGGCTTCC AGGGCGAGGT GACGGTCACC GCGGGCGACT CCGCGATCTC CTCGTGGCAG GTGAGCTGGA CCTTCCCCGG CGGCCAGAGC GTGGCCCACG GCTGGAACGC CAGCTTCAGC GGCACGAGCA CGGTGACGGC CAGCAACCTG TCCTACAACG GCCAGCTGGG TGCGGGACAG TCCGCCACGT TCGGCTTCAT CGGCTCGGGC GACGCGCCTA GCTCGCTGAC GCTGAGCTGC ACCGCTCGCT GA
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Protein sequence | MRKRLAVAAA TVLALLASVF ALTQPANAAT GLHVKNGRLY EANGQEFIIR GVSHPHNWYP QHTQAFADIK SHGANTVRVV LSNGVRWSKN GPSDVANVIS LCKQNRLICM LEVHDTTGYG EQSGASTLDQ AVDYWIELKS VLQGEEDYVL INIGNEPYGN DSATVARWAS DTSAAIQRLR AAGFEHTLVV DAPNWGQDWT NTMRNNADQV YASDPTGNTV FSIHMYGVYS QASTITSYLE HFVNAGLPLI IGEFGHDHSD GNPDEDTIMA EAERLKLGYI GWSWSGNGGG VEYLDMVYNF DGDNLSPWGE RIFYGPNGIA STAKEATIFG GSQPGPTEEP TEEPTEEPTP TPPPAEGDCT ATYATIGSWG GGFQGEVTVT AGDSAISSWQ VSWTFPGGQS VAHGWNASFS GTSTVTASNL SYNGQLGAGQ SATFGFIGSG DAPSSLTLSC TAR
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