6 homologs were found in PanDaTox collection
for query gene Psyr_3123 on replicon NC_007005
Organism: Pseudomonas syringae pv. syringae B728a



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007005  Psyr_3123  type III effector HopAH2  100 
 
 
380 aa  775    Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.608079  normal 
 
 
-
 
NC_004578  PSPTO_3293  type III effector HopAH2-2  67.95 
 
 
416 aa  555  1e-157  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.819559  n/a   
 
 
-
 
NC_004578  PSPTO_3292  type III effector HopAH2-1  58.91 
 
 
404 aa  464  9.999999999999999e-131  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.622578  n/a   
 
 
-
 
NC_004578  PSPTO_0905  type III effector HopAH1  66.67 
 
 
422 aa  382  1e-105  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.436525  n/a   
 
 
-
 
NC_007005  Psyr_0779  type III effector HopAH1  65.2 
 
 
427 aa  374  1e-102  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  normal  0.487257 
 
 
-
 
NC_012034  Athe_1866  Mannan endo-1,4-beta-mannosidase., Cellulase  31.07 
 
 
1414 aa  43.1  0.009  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
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