6 homologs were found in PanDaTox collection
for query gene PSPTO_1403 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_004578  PSPTO_1403  type III secretion protein HrpJ  100 
 
 		 368 aa  744    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  1  n/a   
 
 
-
 
NC_007005  Psyr_1216  type III secretion protein HrpJ  78.05 
 
 		 393 aa  581  1.0000000000000001e-165  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.508976  normal  1 
 
 
-
 
NC_009439  Pmen_0038  TyeA family type III secretion effector delivery regulator  50.66 
 
 		 385 aa  305  8.000000000000001e-82  Pseudomonas mendocina ymp  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012917  PC1_2205  type III secretion regulator YopN/LcrE/InvE/MxiC  31.95 
 
 		 402 aa  149  8e-35  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_012912  Dd1591_1892  type III secretion regulator YopN/LcrE/InvE/MxiC  31.51 
 
 		 393 aa  136  5e-31  Dickeya zeae Ech1591  Bacteria  normal  0.545889  n/a   
 
 
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NC_011769  DvMF_2419  type III secretion regulator YopN/LcrE/InvE/MxiC  22.38 
 
 		 379 aa  43.1  0.007  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  1 
 
 
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