| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DvMF_2419 |
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| Symbol | |
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| ID | 7174353 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris str. 'Miyazaki F' |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011769 |
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| Strand | - |
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| Start bp | 3056624 |
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| End bp | 3057763 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 643540949 |
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| Product | type III secretion regulator YopN/LcrE/InvE/MxiC |
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| Protein accession | YP_002436828 |
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| Protein GI | 218887507 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTCG ATTTTCGTGT CAACGCCCAG GCCACTTCCA CCACCGTGGG CGGCGCGCGG
GGTGACAGGC AGGCGGCGGA CCCGGCTACC GGTTCGCTGC TCGGTCGTAC CGCCACGGTT
GCCGAATCGC CCATGTCGCT GCTGGCCGAC GCCGCCGAGG AGCTGACCTT TGGCGCGGAC
ACCACCGACG ACTTCGAACT GTCCGAGCGC AAGGAACGCC AGAGCACCGA AGACGCCCTG
GCCGAGCGAG TGCAACTGTA CAAGGAACTG ATGCACCAGG CGGGCAAGGG CGAGGCCCTC
GACCGCATGA AGGACGGCCT GCGCGCCAAG CAGGGCAAGG AAGACGCCCT GCGCGAAGCC
CTTTCGCACT TTCCGGACCC CAGCGACGCC TGGGCCGCGC TGTCCGATGC CCTGCGCGAA
TTCGAAGGCG ACCCGGACGT GGCCCCCGGC ACCATTGACG GCATCCGCGC CGCCATCGCA
GAACTGGAAG CCACGCAGGG TCCGGCCATC CGGGCCGGGG TGCAGGGGGC GCTGGCCTCT
GCCGGGTTCG ACGCGCTTGG CGGCAGCGAC GAGTTGCGCG ACCTGTACCG CGACACCGTG
TGCGGCTTTT CCTCTGTCGA GCAGGTGTTC GCGCACCTGA CCGAACGCTA CGGCGAAGCC
AGCTTCGACA CCGCCGTGGA CTTCCTGTAC CGGGCGCTCG GCAACGACCT TGCCTCCGAT
GCGCCCAGCA TGGAAAGCAC CCACCTCGAA AGCGTCAACA CCAGCCTTGG CCAGTTGCGC
CTGCTGCACA GCGCCCACGC CCTGTGCGCG GACGTGATGT CCCGCTGGGA ACGGGTGCAC
GGCGTGTCCG ACTGCCCGCT CACCTCGCGG GCGCTGCTGG AGCAGATGGT GACCCTGCGG
TCGGAAAATT TTCTGGGGGC CATGCACATC GAGCGCATCG CCGCGCAGGC CAAGGCGCCG
GACATCGAAC ACGAGGTGCT GTTCCTGCAG GAAATGCTGC GCATGGCCCG TTCGGTGCCG
CCGCAGCTGT TCAACGGCGT GCAGGGGCGC ATGAAGCTGC TCGACGCCGT GCAGGAGGCC
GTGGACAAGG CCATAGAACG AGAAGACGCC TGGCTGGCGG CACAGGACGG GGGACAATGA
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| Protein sequence | MSFDFRVNAQ ATSTTVGGAR GDRQAADPAT GSLLGRTATV AESPMSLLAD AAEELTFGAD
TTDDFELSER KERQSTEDAL AERVQLYKEL MHQAGKGEAL DRMKDGLRAK QGKEDALREA
LSHFPDPSDA WAALSDALRE FEGDPDVAPG TIDGIRAAIA ELEATQGPAI RAGVQGALAS
AGFDALGGSD ELRDLYRDTV CGFSSVEQVF AHLTERYGEA SFDTAVDFLY RALGNDLASD
APSMESTHLE SVNTSLGQLR LLHSAHALCA DVMSRWERVH GVSDCPLTSR ALLEQMVTLR
SENFLGAMHI ERIAAQAKAP DIEHEVLFLQ EMLRMARSVP PQLFNGVQGR MKLLDAVQEA
VDKAIEREDA WLAAQDGGQ
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