7 homologs were found in PanDaTox collection
for query gene Dd1591_1892 on replicon NC_012912
Organism: Dickeya zeae Ech1591



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012912  Dd1591_1892  type III secretion regulator YopN/LcrE/InvE/MxiC  100 
 
 
393 aa  794    Dickeya zeae Ech1591  Bacteria  normal  0.545889  n/a   
 
 
-
 
NC_012917  PC1_2205  type III secretion regulator YopN/LcrE/InvE/MxiC  72.51 
 
 
402 aa  482  1e-135  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_1216  type III secretion protein HrpJ  30.98 
 
 
393 aa  142  9.999999999999999e-33  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.508976  normal 
 
 
-
 
NC_004578  PSPTO_1403  type III secretion protein HrpJ  31.51 
 
 
368 aa  141  3e-32  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_009439  Pmen_0038  TyeA family type III secretion effector delivery regulator  28.43 
 
 
385 aa  89.4  1e-16  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_008741  Dvul_3004  type III secretion regulator YopN/LcrE/InvE/MxiC  25.71 
 
 
374 aa  67.4  0.0000000004  Desulfovibrio vulgaris DP4  Bacteria  normal  0.552336  n/a   
 
 
-
 
NC_011769  DvMF_2419  type III secretion regulator YopN/LcrE/InvE/MxiC  25.36 
 
 
379 aa  62.8  0.000000009  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal 
 
 
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