| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dd1591_1892 |
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| Symbol | |
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| ID | 8119369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dickeya zeae Ech1591 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012912 |
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| Strand | - |
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| Start bp | 2160752 |
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| End bp | 2161933 |
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| Gene Length | 1182 bp |
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| Protein Length | 393 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 644852283 |
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| Product | type III secretion regulator YopN/LcrE/InvE/MxiC |
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| Protein accession | YP_003004221 |
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| Protein GI | 251789500 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR02511] type III secretion effector delivery regulator, TyeA family
[TIGR02568] type III secretion regulator YopN/LcrE/InvE/MxiC |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.545889 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCAC TCAATAACGT TTCTTCCGTG CTCAATACCA GCAGCACGGC CGTCAACAAT
AATGACAATG ATATCGACGA GCAGACGCCG ATCGGCTCAC CGTCTAAAAC CGGCGAGGCT
CGTCCCTCGC ACGACAAAAC CCTCAACGAC GCGATGGAAG AAGTCGCCGC CAGCTTTGGC
GAGCAGATTG AACGCAAAAG CAAAGCGCTT AACCGCCGGC AAATCAGCCA GCCGCAGAGC
CGTATGATGG CCAACATTGA ACGCATCGAA AAACTGACCG AGCTGTTCGA ATTGCTGGAA
AACCCGAAGC ACCCGACGCT TGACCAGCAA ATCCGTCAGA TGCAGGGGTT GTTGGGTCAG
TCCTCGCCGC CATCGGTCGA CGCCATCATG CAGGCGGCGG GCGGCGACGC GGCGCGCAGC
GATATCGTTC TGCGTCATGT ACTGAGCCAG GCGCAACAAC AGCAGGATGC GTCGCTCACC
CAGGCCGCCG GCCAAAGCCT GGAAAAGTTA CATCAGGAAA AAGGGCCGGA AGTTCGGGCG
GGGCTCAACA CCGCCGCCGC CATTTCCCTG TTCAGTACCG ACCCTAACCA GAAGCAGGCG
CTGCGCGACC TCTACTATCA GCGCATTGTC CATCAACAAT CTCCCAGCGC CCTGCTCGAT
GCCTTACTGG AACGCTTCGA TGCACAACAC TTCGCGGCCG GGTTGCGCAC ACTGCAACGC
GCGCTGGCGG CGGATATTGC CTCACTGGCG CCGTCTATTT CAAAAAATGT GCTGAGCAAA
ATGCTCACCA GCCTGAACGA CTCGCGCCAG CTGAGCCACA CGCTGTCGGC CAGCCAGTCG
CTGCTGGCGC GGCTGGCGTC GCGTATGCCG GAATGCACGC TGGGTGCGGT AGAACTGACG
CGACGATTGA TCGGCCTGAG CGCTAACGGC GCTTACGCCC GCGACTTGCA TAATCTGGGC
CGCGAAGTCG CCGGGCAGGA TCTCCAGCGC CAGCTGATGT TTTTCAATGG CCTGCTGCCG
CTGGTCAACG ACCTGCCGCA CCCGCTGTGG CGCGATGCGA AAAATCGGCT CACCGCTCTG
CAACTGATTC GCAGCCTGAT CGGCGATTTC GCCCAGTACG AAAAGCAACA GCAGCAGGAT
AACGCCGCAT CAATGAACGA CCGTTCTCGG AACAAGGGGT AA
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| Protein sequence | MISLNNVSSV LNTSSTAVNN NDNDIDEQTP IGSPSKTGEA RPSHDKTLND AMEEVAASFG
EQIERKSKAL NRRQISQPQS RMMANIERIE KLTELFELLE NPKHPTLDQQ IRQMQGLLGQ
SSPPSVDAIM QAAGGDAARS DIVLRHVLSQ AQQQQDASLT QAAGQSLEKL HQEKGPEVRA
GLNTAAAISL FSTDPNQKQA LRDLYYQRIV HQQSPSALLD ALLERFDAQH FAAGLRTLQR
ALAADIASLA PSISKNVLSK MLTSLNDSRQ LSHTLSASQS LLARLASRMP ECTLGAVELT
RRLIGLSANG AYARDLHNLG REVAGQDLQR QLMFFNGLLP LVNDLPHPLW RDAKNRLTAL
QLIRSLIGDF AQYEKQQQQD NAASMNDRSR NKG
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