13 homologs were found in PanDaTox collection
for query gene PCC7424_4094 on replicon NC_011729
Organism: Cyanothece sp. PCC 7424



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_011729  PCC7424_4094  Roadblock/LC7 family protein  100 
 
 
168 aa  339  1e-92  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_011729  PCC7424_4311  Roadblock/LC7 family protein  30.77 
 
 
426 aa  85.5  3e-16  Cyanothece sp. PCC 7424  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2813  roadblock/LC7 family protein  29 
 
 
120 aa  48.9  0.00003  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.581423  hitchhiker  0.00000177948 
 
 
-
 
NC_010524  Lcho_0658  roadblock/LC7 family protein  28.81 
 
 
120 aa  48.9  0.00003  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_010524  Lcho_2108  roadblock/LC7 family protein  28.81 
 
 
120 aa  47.8  0.00007  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.854145 
 
 
-
 
NC_010730  SYO3AOP1_0078  Roadblock/LC7 family protein  31 
 
 
119 aa  47  0.0001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  0.160642  n/a   
 
 
-
 
NC_010730  SYO3AOP1_1333  Roadblock/LC7 family protein  31 
 
 
119 aa  47  0.0001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  n/a   
 
 
-
 
NC_007484  Noc_1488  roadblock/LC7 domain-contain protein  23.81 
 
 
120 aa  45.1  0.0005  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000000487371  n/a   
 
 
-
 
NC_011884  Cyan7425_5249  Roadblock/LC7 family protein  29.35 
 
 
119 aa  45.1  0.0005  Cyanothece sp. PCC 7425  Bacteria  normal  0.955788  normal  0.810313 
 
 
-
 
NC_011831  Cagg_3625  Roadblock/LC7 family protein  24.59 
 
 
122 aa  43.9  0.001  Chloroflexus aggregans DSM 9485  Bacteria  normal  0.3607  normal 
 
 
-
 
NC_011884  Cyan7425_2399  Roadblock/LC7 family protein  29.35 
 
 
122 aa  43.9  0.001  Cyanothece sp. PCC 7425  Bacteria  normal  0.315858  normal  0.818253 
 
 
-
 
NC_011206  Lferr_2208  Roadblock/LC7 family protein  24 
 
 
120 aa  41.6  0.005  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.518676  normal  0.172353 
 
 
-
 
NC_011761  AFE_2578  roadblock/LC7 domain protein  24 
 
 
120 aa  41.6  0.005  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
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