Gene Lferr_2208 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2208 
Symbol 
ID6878199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2186785 
End bp2187147 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content61% 
IMG OID642790066 
ProductRoadblock/LC7 family protein 
Protein accessionYP_002220618 
Protein GI198284297 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.518676 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.172353 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAG AAATGCTCAA ATCCATCCTC AGTGACCTGA ACGGGTCTTC TGCGGACATC 
GAGGCCTCAG CCGTGATTTC CACCGACGGC CTCACCATCG CCTCACTGCT TTCTTCGACC
ATGGACGAAG ACCGGGTAGG GGCCATGGCG GCGGCGATGC TTTCCCTGGG CGACCGCACC
GCCGCAGAGC TGGCGCGGGG TGAACTGGAG CAGGTCATGA TCAAGGGCGA TAACGGCTAC
GTTCTGCTCA TTCATGCCGG CCCCGATGCA GTCCTCACGG TCATAGCCCG AAAAGAAGCG
AAGCTTGGGC TGGTCTTTCT CGACGCCAAG CGGGGAGCTG CGGGGATCGC CGAGCTGCTT
TGA
 
Protein sequence
MREEMLKSIL SDLNGSSADI EASAVISTDG LTIASLLSST MDEDRVGAMA AAMLSLGDRT 
AAELARGELE QVMIKGDNGY VLLIHAGPDA VLTVIARKEA KLGLVFLDAK RGAAGIAELL