Gene SYO3AOP1_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSYO3AOP1_0078 
Symbol 
ID6331268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSulfurihydrogenibium sp. YO3AOP1 
KingdomBacteria 
Replicon accessionNC_010730 
Strand
Start bp88719 
End bp89078 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content36% 
IMG OID642656358 
ProductRoadblock/LC7 family protein 
Protein accessionYP_001930280 
Protein GI188996029 
COG category[R] General function prediction only 
COG ID[COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.160642 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTGTTA AATATACAGA AATACTTGAA GAATTTATTA GAGACTCTGG GGCAGAGGGT 
GCCGTATTAG TAAGCGTTGA TGGATTAGCT ATTGCATCTG TACTTCCAAG CTCAGCAGAT
GAAGATAGAG TTGCAGCTAT GGGTGCTGCT ATATTATCCC TTGGTGAAAG AGTGACATCA
GAATTAAATA AAGGAAATCT TGAACAGTTA TACATTAAAG GTTCTACTGG ATATGTTATA
TTTACAGGAA TTAAGGATGT TGCCGTTCTT GGAGTTCTCG CTCCGGTCAA TGCAAAATTA
GGTCTTTTAT TAATGGAAAT TCAGAGAACT ATAAAAAAAC TTGAGCAAGA ATTGGGATAA
 
Protein sequence
MAVKYTEILE EFIRDSGAEG AVLVSVDGLA IASVLPSSAD EDRVAAMGAA ILSLGERVTS 
ELNKGNLEQL YIKGSTGYVI FTGIKDVAVL GVLAPVNAKL GLLLMEIQRT IKKLEQELG