Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | SYO3AOP1_0078 |
Symbol | |
ID | 6331268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sulfurihydrogenibium sp. YO3AOP1 |
Kingdom | Bacteria |
Replicon accession | NC_010730 |
Strand | + |
Start bp | 88719 |
End bp | 89078 |
Gene Length | 360 bp |
Protein Length | 119 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 642656358 |
Product | Roadblock/LC7 family protein |
Protein accession | YP_001930280 |
Protein GI | 188996029 |
COG category | [R] General function prediction only |
COG ID | [COG2018] Uncharacterized distant relative of homeotic protein bithoraxoid |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.160642 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGTTA AATATACAGA AATACTTGAA GAATTTATTA GAGACTCTGG GGCAGAGGGT GCCGTATTAG TAAGCGTTGA TGGATTAGCT ATTGCATCTG TACTTCCAAG CTCAGCAGAT GAAGATAGAG TTGCAGCTAT GGGTGCTGCT ATATTATCCC TTGGTGAAAG AGTGACATCA GAATTAAATA AAGGAAATCT TGAACAGTTA TACATTAAAG GTTCTACTGG ATATGTTATA TTTACAGGAA TTAAGGATGT TGCCGTTCTT GGAGTTCTCG CTCCGGTCAA TGCAAAATTA GGTCTTTTAT TAATGGAAAT TCAGAGAACT ATAAAAAAAC TTGAGCAAGA ATTGGGATAA
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Protein sequence | MAVKYTEILE EFIRDSGAEG AVLVSVDGLA IASVLPSSAD EDRVAAMGAA ILSLGERVTS ELNKGNLEQL YIKGSTGYVI FTGIKDVAVL GVLAPVNAKL GLLLMEIQRT IKKLEQELG
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