12 homologs were found in PanDaTox collection
for query gene PC1_2245 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_2245  Prolyl 4-hydroxylase alpha subunit  100 
 
 		 217 aa  455  1e-127  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008752  Aave_3716  SanC, putative  62.67 
 
 		 219 aa  293  1e-78  Acidovorax citrulli AAC00-1  Bacteria  normal  0.958336  normal  0.155047 
 
 
-
 
NC_007413  Ava_4036  prolyl 4-hydroxylase, alpha subunit  26.55 
 
 		 224 aa  85.5  5e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  1  normal  0.578065 
 
 
-
 
NC_007604  Synpcc7942_1895  hypothetical protein  29.87 
 
 		 270 aa  53.9  0.000002  Synechococcus elongatus PCC 7942  Bacteria  normal  0.0297003  normal  1 
 
 
-
 
NC_009485  BBta_0640  hypothetical protein  31.63 
 
 		 271 aa  48.1  0.00009  Bradyrhizobium sp. BTAi1  Bacteria  hitchhiker  0.00227102  normal  1 
 
 
-
 
NC_007973  Rmet_2547  proline hydroxylase-like protein  27.41 
 
 		 277 aa  47.4  0.0001  Cupriavidus metallidurans CH34  Bacteria  normal  1  normal  0.259291 
 
 
-
 
NC_009484  Acry_1264  hypothetical protein  30.15 
 
 		 228 aa  47.8  0.0001  Acidiphilium cryptum JF-5  Bacteria  normal  1  n/a   
 
 
-
 
NC_011894  Mnod_0668  Prolyl 4-hydroxylase alpha subunit  27.42 
 
 		 210 aa  46.2  0.0003  Methylobacterium nodulans ORS 2060  Bacteria  normal  1  n/a   
 
 
-
 
NC_008347  Mmar10_1758  hypothetical protein  25.66 
 
 		 227 aa  43.9  0.002  Maricaulis maris MCS10  Bacteria  normal  0.348328  normal  0.303504 
 
 
-
 
NC_011729  PCC7424_5183  proline hydroxylase-like protein  30.61 
 
 		 323 aa  42.4  0.006  Cyanothece sp. PCC 7424  Bacteria  n/a    hitchhiker  0.000000154624 
 
 
-
 
NC_010511  M446_1851  hypothetical protein  25.81 
 
 		 210 aa  41.6  0.009  Methylobacterium sp. 4-46  Bacteria  normal  0.1503  normal  1 
 
 
-
 
NC_010505  Mrad2831_3432  hypothetical protein  25.81 
 
 		 210 aa  41.6  0.01  Methylobacterium radiotolerans JCM 2831  Bacteria  normal  0.30695  normal  0.242236 
 
 
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