| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4036 |
|---|
| Symbol | |
|---|
| ID | 3682165 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5021811 |
|---|
| End bp | 5022485 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637719388 |
|---|
| Product | prolyl 4-hydroxylase, alpha subunit |
|---|
| Protein accession | YP_324536 |
|---|
| Protein GI | 75910240 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.578065 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC TCCAATCTAT TCGTACCGCA GTCATCCAAA AAGTTCCGTA TCATTGGGCT
TTAATTAAAG ATTTATTATC AAAAGAAGTA AGTCTAGAAT TAACCGCCAG TTTTCCCAAA
CAAGATTTTT TCCTATCAAC AGGGGAGGGT TACGGCTATT ACTGGGGAAA GATAATTGCT
TCTAGTCAAG ATATTCCTTT ACTACTCAAA TTTAAAGACG ATCGCTGGCG ACAACGCCTT
GCACAAGGAA AACTAACTTC TGACTTAAAA CACCTCAGTC ATGCGTGGCG AAATCTGATA
GAAGGACTCT GGACAAATGC TTATCGTCAA GCTTTGGGAG ATATGACTGG CTTAGATTTG
ACAGATTGTG TAATGGATAT TGGATTTCGT CAATATAAAT CAGGACATCA ACATTTTCCC
CATACAGATG AACCGAATAA GGTTTTAACT CATCTGCTAT TTTTCAATCA AGAATGGTCA
GAAAATTGGG GTGGTTGTTT GCGGATTCTT AAAGGCTCTG AACCGGATTC GGCTTTTCAA
GATATCTTAC CTTTGAGTCA TTCTTCAGTT GTGATTGTGC GTTCTGATAA TTCTTGGCAC
ATGGTAACTC CGGTTACTTC TCCTACATCT GAAAGTCGCT TGGCTTTACG AGTAGCCTTT
TTTCGGAATG TTTAG
|
|---|
| Protein sequence | MINLQSIRTA VIQKVPYHWA LIKDLLSKEV SLELTASFPK QDFFLSTGEG YGYYWGKIIA
SSQDIPLLLK FKDDRWRQRL AQGKLTSDLK HLSHAWRNLI EGLWTNAYRQ ALGDMTGLDL
TDCVMDIGFR QYKSGHQHFP HTDEPNKVLT HLLFFNQEWS ENWGGCLRIL KGSEPDSAFQ
DILPLSHSSV VIVRSDNSWH MVTPVTSPTS ESRLALRVAF FRNV
|
|---|
| |