Gene PC1_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_2245 
Symbol 
ID8133189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand+ 
Start bp2582106 
End bp2582759 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content54% 
IMG OID644865532 
ProductProlyl 4-hydroxylase alpha subunit 
Protein accessionYP_003017819 
Protein GI253688629 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3751] Predicted proline hydroxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCGACT ATTTTGATCT TGAACGTATC ATCCACGGCA AACGACATGA AACCCCGTTC 
CAGTGGGGTG AATTAACCCA GATATGGCGT AACAGCAGCA TCGCCTCGAC GCTTGCCCAT 
GAGTTCCCAA CCGATGGATT TAACTACCGT GAACGTAACG GCGGTTACTT TTATCGTCGA 
ACGCTGATTC CTTTAGCCTC CGGCAAAGTG AGCGATGCCA CTACGCTCTC TGACGCCTGG 
CTGGGAATGT GTAACGAGCT GACCTCTGAC GCCTTTACTG CCGCCCTGTC CGCCTTCTGC 
GGGGCCGACC TTTCCGAACT CAAAATGGAA GCGGTGGCTT TTCGCGGCGG CCGGGACACC 
CACTATCTCC CCCATGTCGA TGCGTCGCTG AAACGCGGAT TCCGCCTGAT TATCTATTTC 
AACGCCGAAT GGGAAGAAAG CTGGGGCGGC GCCTTTCAGA TTCTCAACCC AGACAACCAT 
GCTGACGTCT GTCATTCCGT TCTCCCGATC ATGGGCAACG CCAGCGTTAT CATCCGCAAC 
GGATTTTATG AAACCTGGCA TGCCGTCGTG CCACTAACTG GCGTTTCTGT CAAAACACGT 
AATGCGCTGA ATATTACCTA TTACGAACCG GGCACGACGA GTACGGCACA GTGA
 
Protein sequence
MSDYFDLERI IHGKRHETPF QWGELTQIWR NSSIASTLAH EFPTDGFNYR ERNGGYFYRR 
TLIPLASGKV SDATTLSDAW LGMCNELTSD AFTAALSAFC GADLSELKME AVAFRGGRDT 
HYLPHVDASL KRGFRLIIYF NAEWEESWGG AFQILNPDNH ADVCHSVLPI MGNASVIIRN 
GFYETWHAVV PLTGVSVKTR NALNITYYEP GTTSTAQ