Gene Synpcc7942_1895 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSynpcc7942_1895 
Symbol 
ID3775258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSynechococcus elongatus PCC 7942 
KingdomBacteria 
Replicon accessionNC_007604 
Strand
Start bp1967770 
End bp1968582 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content57% 
IMG OID637800336 
Producthypothetical protein 
Protein accessionYP_400912 
Protein GI81300704 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0297003 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGCACTA CGCTCGCTCC CACAACGTTC CTAGACCCGC AGGTGCTCGC TGGCCTAGAC 
GTGGATGCTT TCTTGCAGCG ATCGCCTTTT CCGTGGCTCA ACCCAGTAGG GCTGCTTGCG
GCTCCTGCAT TTGAGCAATT GTGTGCGCAG TTCCCTCCGC TCAGTCTATT TGAACGCCAT
GAAAGCCGCA GTCGGCACTA TGGCCAGCGC CCTCACGATC GCTACTACCT GGCCTACGAG
ACATCGATTT ACCACGGGCC AAGTGCTGGC GCCTCAGCTC CTGGCGTCGC TCGACTCACA
GATCTGCCCT TACCGTGGCA GCAATTCTTG ACTGAGCTTC AGACTTCAGA GTCTTTCCAT
CGATTCATTC GTCAGGCCTT GGGTAGCGAT CGCTACCTGA TGCGTTTTGC CTGGCATGTG
GGAACGGGTG GTTCAGAAGT GTCGCCGCAC CTTGATTCCG AGCTGAAGAT TGGCACCCTG
ATTTTCTACT TCAATACCGA TGCCAATTGG GATCCAGCTT GGGGTGGGGC AACGCTGGTT
CTAGGCGATC GCAAAACCAA GGTGATGAAT CCCGACTTCA ACCAATTTGG CACCATCATC
CCCACACAGT TTCTCAACAA CCGCTGCTTC CTATTCCGCA ATACCCCTGA AGCGTGGCAT
GGCGTTGAGG CACTCACCTG CCCCGCAGGA CAGCAGCGAC GACTGTTTAA CGTGGTGTTT
GAGCTGCCCG AAAGTCGCCC CGCTGTGACG ACAGCGGACC TCGGATCAAA ACGGCAACGC
CTCAAGCAGC TGATCAAGCG ACTCCTGCCC TAA
 
Protein sequence
MGTTLAPTTF LDPQVLAGLD VDAFLQRSPF PWLNPVGLLA APAFEQLCAQ FPPLSLFERH 
ESRSRHYGQR PHDRYYLAYE TSIYHGPSAG ASAPGVARLT DLPLPWQQFL TELQTSESFH
RFIRQALGSD RYLMRFAWHV GTGGSEVSPH LDSELKIGTL IFYFNTDANW DPAWGGATLV
LGDRKTKVMN PDFNQFGTII PTQFLNNRCF LFRNTPEAWH GVEALTCPAG QQRRLFNVVF
ELPESRPAVT TADLGSKRQR LKQLIKRLLP