Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Synpcc7942_1895 |
Symbol | |
ID | 3775258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Synechococcus elongatus PCC 7942 |
Kingdom | Bacteria |
Replicon accession | NC_007604 |
Strand | + |
Start bp | 1967770 |
End bp | 1968582 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637800336 |
Product | hypothetical protein |
Protein accession | YP_400912 |
Protein GI | 81300704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0297003 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCACTA CGCTCGCTCC CACAACGTTC CTAGACCCGC AGGTGCTCGC TGGCCTAGAC GTGGATGCTT TCTTGCAGCG ATCGCCTTTT CCGTGGCTCA ACCCAGTAGG GCTGCTTGCG GCTCCTGCAT TTGAGCAATT GTGTGCGCAG TTCCCTCCGC TCAGTCTATT TGAACGCCAT GAAAGCCGCA GTCGGCACTA TGGCCAGCGC CCTCACGATC GCTACTACCT GGCCTACGAG ACATCGATTT ACCACGGGCC AAGTGCTGGC GCCTCAGCTC CTGGCGTCGC TCGACTCACA GATCTGCCCT TACCGTGGCA GCAATTCTTG ACTGAGCTTC AGACTTCAGA GTCTTTCCAT CGATTCATTC GTCAGGCCTT GGGTAGCGAT CGCTACCTGA TGCGTTTTGC CTGGCATGTG GGAACGGGTG GTTCAGAAGT GTCGCCGCAC CTTGATTCCG AGCTGAAGAT TGGCACCCTG ATTTTCTACT TCAATACCGA TGCCAATTGG GATCCAGCTT GGGGTGGGGC AACGCTGGTT CTAGGCGATC GCAAAACCAA GGTGATGAAT CCCGACTTCA ACCAATTTGG CACCATCATC CCCACACAGT TTCTCAACAA CCGCTGCTTC CTATTCCGCA ATACCCCTGA AGCGTGGCAT GGCGTTGAGG CACTCACCTG CCCCGCAGGA CAGCAGCGAC GACTGTTTAA CGTGGTGTTT GAGCTGCCCG AAAGTCGCCC CGCTGTGACG ACAGCGGACC TCGGATCAAA ACGGCAACGC CTCAAGCAGC TGATCAAGCG ACTCCTGCCC TAA
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Protein sequence | MGTTLAPTTF LDPQVLAGLD VDAFLQRSPF PWLNPVGLLA APAFEQLCAQ FPPLSLFERH ESRSRHYGQR PHDRYYLAYE TSIYHGPSAG ASAPGVARLT DLPLPWQQFL TELQTSESFH RFIRQALGSD RYLMRFAWHV GTGGSEVSPH LDSELKIGTL IFYFNTDANW DPAWGGATLV LGDRKTKVMN PDFNQFGTII PTQFLNNRCF LFRNTPEAWH GVEALTCPAG QQRRLFNVVF ELPESRPAVT TADLGSKRQR LKQLIKRLLP
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