8 homologs were found in PanDaTox collection
for query gene PC1_1088 on replicon NC_012917
Organism: Pectobacterium carotovorum subsp. carotovorum PC1



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_012917  PC1_1088  hypothetical protein  100 
 
 		 712 aa  1467    Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.979712  n/a   
 
 
-
 
NC_013421  Pecwa_2885  putative bacteriophage tail fiber protein  54.17 
 
 		 462 aa  63.5  0.00000001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_012917  PC1_1577  Tail Collar domain protein  54.17 
 
 		 682 aa  61.2  0.00000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009253  Dred_1223  hypothetical protein  41.03 
 
 		 145 aa  57.8  0.0000008  Desulfotomaculum reducens MI-1  Bacteria  normal  0.388112  n/a   
 
 
-
 
NC_008390  Bamb_1862  phage tail collar domain-containing protein  46.15 
 
 		 735 aa  51.6  0.00005  Burkholderia ambifaria AMMD  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_1537  Tail Collar domain protein  42.86 
 
 		 621 aa  47.8  0.0006  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
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NC_012917  PC1_2736  Tail Collar domain protein  43.14 
 
 		 689 aa  45.8  0.003  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_007520  Tcr_0691  hypothetical protein  43.48 
 
 		 340 aa  45.1  0.005  Thiomicrospira crunogena XCL-2  Bacteria  normal  1  n/a   
 
 
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