Gene PC1_2736 details

Gene Information

• Locus tag: PC1_2736
• ID: 8133689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pectobacterium carotovorum subsp. carotovorum PC1
• Kingdom: Bacteria
• Replicon accession: NC_012917
• Strand: +
• Start bp: 3102580
• End bp: 3104649
• Gene Length: 2070 bp
• Protein Length: 689 aa
• Translation table: 11
• GC content: 52%
• IMG OID: 644866024
• Product: Tail Collar domain protein
• Protein accession: YP_003018302
• Protein GI: 253689112
• COG category: [R] General function prediction only
• COG ID: [COG5301] Phage-related tail fibre protein

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAATT TATCTGAACA AGAAAGCTGG ATTGATGGAA TTTATCAGCT TGAGACATCG 
GATCCCGTTG TCGCAGGTCC AGGAGGAATC TCCAACCGTC AGGCAGAGCA GTTAGCCAGC 
CGTACGACCT ATCTGAAAAA AATGCAGGAA ACCACGGGCA AGAGTTTGCA AACCCATCTC 
GCCGCCAGCG ATCCGCATTC GCAATATGCC CCCAAAAATA GCCCGGCGTT GACGGGGACA 
CCTACTGCAC CTACCACAGC GCAGACGACA AATAACACAC AAATTGCCAC TACGGCATTT 
GTGAAAACGG CCATTGCCGC ACTGATCAAT GGTTCTCCTG CGGCACTGGA TACACTGCAA 
GAGTTGGCGA ATGCGTTAGG CAACGATCCG CACTTCAGCA CAACCATATT GAATGCGATT 
GCTGATGTGA AAACTGATGC GGCCAATAAG CTGAATGCCC ATGCTTCCGT CCTCGATGCA 
CACCCTCGAT ATGCCCCGAA AGACAGCCCT GCGTTAACGG GTACCCCAAC AGCACCGACG 
GCTGCCTCCA ATTCTAATAA CACGCAATTG GCGACGACCG CCTTTGTGAA AGCCGCCGTA 
GCAGCATTGG TAAACGGTTC ACCTGCCGCG CTTGATACGC TGCAAGAGCT GGCGGCGGCA 
TTAGGTAATG ATCCGAACTT CTCCACCACG ATATTAAATG CGCTGGCGGG CAAGCTGGCG 
AAAGACCAGA ACGGGGCGGA TATTTCTGAT AAGGCGAAAT TTCTTTCAAC ACTCGTTTAT 
CGCGGTGAGC TTGTTAATCA CGGAACATTT GCGGCATGTA ATCGGGAGGG AGTTTATCGA 
GTAGCGCTTA GTGACGGTAA TACCGTTACA GACATGCCCA GAAACATTCG CGGGGAAATT 
CTGTATTCAT ACGGTTTTTT ATTTGTTAAC GAAATCGGCG GTGCCATTAG TCAGATGTAT 
TTACCTCATC GCGGACCAGT AGCAACACGT CAGAATTGGG ATGGTAGCTA TTCGCTGGGT 
TGGAATGTCA CGCTGGATGG ATTGACGAAT AAACCCAGCG CTACCGATAT TGGCGCATTC 
CCGCTTGGCT TTACTGGTAC TGTAAATAAT GATGAAGTTG CGTGGGATGC GAATTCTGGC 
GTTTATCGTG CTCAGTACCC TGGTGCAGGA CAAATGCTTA TCCACTTTCA TGGTGCTGGG 
GCTAGCTGCC CATCGTTGCA ATTTCTCGGC GAGTATGGAA ATGGCGGCCT GTCATACCGG 
ACGGCGCGTG ATGGAATGGG GTTTGAGCAT TCGTGGGCAA AAATATATAC AACACAATTT 
AAACCAACTG CTGCTGATGT GGGAGCATTG CCTATCGCGG GCGGTGCGTT ACAGGGCGGA 
ATCCGCATAG GTGCGGGGAA TATAGATTTA CCCGCCAGAC GCGCAGTAGT CGGTGTGATG 
CCCGATGAGA GCTACAGGCA AATGCTGTCG TTGTCACCCG ATAACACTGT TGTTTTCGGC 
AATCCAAACA GCTCCGCGGT TATTCATACA ACAGACCGCG TATACATTGC AGCGGCAGGT 
GGTGCATGGC GTTCAGTCTA TCACGAGGGG AATCTAACCC CTGCCGCAAT CGGCGCTATG 
CCCGCATCTG AACTAGCTGG CATCCCCCTG CCATTCCCCG GCGCTGTCGC CCCTACTGGC 
TGGCTAAAAT GCAACGGTCA ATCATTTGAT AAATCACAGT ATCCGATTTT AGCATCCCGT 
TATCCGTCTG GTGTCCTGCC GGATCTACGC GGCGAGTTCG TGCGCGGCTG GGATGACGGG 
CGCGGCGCTG ATGCAAGTCG GGCACTGCTT TCAGCGCAGG GAGATGCAAT TAGGAATATT 
GTTGGGACAA TCGGTCAGCT AAACGACCGC GTTAACACAA CAGAAACAGC CGGAGTTTTT 
GATGCTAATA AATACACTGG GGCGCATTCA GGATTGACTG GCGGAAACGG AGGCAGAATT 
GCCACATTTG ATGCGTCCAA AGTCGTCCCA ACAGCAGCCG AAAACCGTCC ACGCAATATC 
GCCTTTAACT ACATCGTGAG AGCAGCATAA 

 

Protein sequence

MANLSEQESW IDGIYQLETS DPVVAGPGGI SNRQAEQLAS RTTYLKKMQE TTGKSLQTHL 
AASDPHSQYA PKNSPALTGT PTAPTTAQTT NNTQIATTAF VKTAIAALIN GSPAALDTLQ 
ELANALGNDP HFSTTILNAI ADVKTDAANK LNAHASVLDA HPRYAPKDSP ALTGTPTAPT 
AASNSNNTQL ATTAFVKAAV AALVNGSPAA LDTLQELAAA LGNDPNFSTT ILNALAGKLA 
KDQNGADISD KAKFLSTLVY RGELVNHGTF AACNREGVYR VALSDGNTVT DMPRNIRGEI 
LYSYGFLFVN EIGGAISQMY LPHRGPVATR QNWDGSYSLG WNVTLDGLTN KPSATDIGAF 
PLGFTGTVNN DEVAWDANSG VYRAQYPGAG QMLIHFHGAG ASCPSLQFLG EYGNGGLSYR 
TARDGMGFEH SWAKIYTTQF KPTAADVGAL PIAGGALQGG IRIGAGNIDL PARRAVVGVM 
PDESYRQMLS LSPDNTVVFG NPNSSAVIHT TDRVYIAAAG GAWRSVYHEG NLTPAAIGAM 
PASELAGIPL PFPGAVAPTG WLKCNGQSFD KSQYPILASR YPSGVLPDLR GEFVRGWDDG 
RGADASRALL SAQGDAIRNI VGTIGQLNDR VNTTETAGVF DANKYTGAHS GLTGGNGGRI 
ATFDASKVVP TAAENRPRNI AFNYIVRAA