Gene PC1_1577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPC1_1577 
Symbol 
ID8132518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePectobacterium carotovorum subsp. carotovorum PC1 
KingdomBacteria 
Replicon accessionNC_012917 
Strand
Start bp1830294 
End bp1832342 
Gene Length2049 bp 
Protein Length682 aa 
Translation table11 
GC content47% 
IMG OID644864866 
ProductTail Collar domain protein 
Protein accessionYP_003017156 
Protein GI253687966 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGAATT TGTCAGAGAA CCCGCAATGG GTTGACGGCA TTTACCAAAT CGAAACGTCA 
GATCCGGTCG TAGGTGGACC GGATGGCGTT TCAAACCGAC AGGCTAAAGA ATTGGCCAGT
CGTACCCGCT ATTTGAAAAA AGAGCAGGAA AAAACGGGCA GCGATCTGGC GACGCACGCC
GCTGCCGCCG ATCCGCATAC ACAATACGCA CCGAAGGCGA ACCCAACCTT CACAGGCACG
CCGAAAGCGC CAACGCCTGC AACTGACAGC AATAGCCAGC AGATTGCGAC GACGGCGTTT
GTACGTTCAG TCGGTGCGAC GAAACTGGCG AAAGATCAAA ACGGGGCAGA TATTCCTGAT
CGAGAGCTGT TCAACCGCAA TCTCGGTTCA TCACGTGCAT ACAGTTCTTC GATCCCAATT
GGAGGAAGCG ATGGTTTATG GACAACCGCT GAGTTCATTG GCTGGTTAGA AAGCCAAGGG
GCTTTTGTTC ATGCTTATTG GGTTTGTCGT GGTTCGTGGT CGTACTCCCA CAATAAAATC
ATCTCTGATA CAGAGTGCGG TCAAATACCG CTGGCCGGCT CTGTTGTTGA GGTTATGGGG
CAAAACGATG CTACGACGAT CAGGATAACA ACGCCTTCAA CAACGCCAGC TGGGTTTAGC
GATTCAGCGA ATGCTCAATT CACTTATATC TATAATGGCG TTGATTATTC TCCCGGTTGG
AGACGTGATT ACAATACGAA GAATAAACCG ACGGCGGCCG ATATTGGCGC ATTACCAGAA
AAAGCTGTCG CCCAGGCAGC CGCAAAACTG GCAACACCGC GTACCATCAA CGGTGTGCCG
TTTGATGGCT CGGCCAATAT TGCACTGACT CCCGCAAACC TCGGTTTAAC TGAAACTGTT
AATCTTGCTG CTGGAGCGTT GGAAAAAGCC AAGAATGGCG CGGATATTTC TGACAAAACG
GCGTTTTACA GCAATGTGAC ATTACGTGGC ACGTTAAGCG ATGGTATGAC CTTCGCCAAC
TGCGATAAAG CAGGTGATTA TGTTGTTGCG ATAAACGATC CCAATACCGT TTCTGACATG
CCCCTTTATA AGGGGCAGAA ATTATACGGA TATGGTGTGC TTCATGTTTT TCAGCACGGT
AATTTCGTCG GGCAAGAATA TATCAATCAT AGCGGAGACT ATGCCTGGCG GCAGAAATGG
GATGATGGCA TTAATACACC TTGGGTTGTT GCGCTTAGTT CGTCACGTGT ACCGACAGCC
GCTGATGTGG GGGCTATAAC AAAAACGGAT GCCGATAGTC ATTATGTTCA TCAGGGATCA
TCAGGTGTTA TCTATCAGGA CAGCGACCTC GCATGGGATA GCCCTACCGG TGCGTATTTA
AAAGATAACG GTACACATTC ATCCCTAATT TGGCATATGG GTTTAAATGC TGGCTCTGCA
TCAGCAGCTC AGTTCTATTT TGACTTTGCT AATGGCGGAA TAAAATATCG AAGCTCTCGT
GATAATAGCG GTTTTGAAAA ACCGTGGGCA CGTATTTATA CCGATCAGGA TAAGCCAACA
GCTGCTGATA TTGGGGCGTT ATCACTTAAT GAGATTGTTG GCATGCCAAT GCCATGGCCG
CAAACGACAG CTCCATCTGG TTGGCTAAAA TGTAATGGGC AGACATTTGA TAAAAATATT
TACCCTAAAT TAGCACAAAT TTATCCAGCA GGAATATTAC CAGACCTCCG TGGTGAATTT
ATTCGTGGAT GGGATGATAG CAGAGGTGTT GATACCGGAC GTACTTTGCT AAGCACTCAA
GGTGATGCTA TCAGAAACAT TGTGGGTGAA ATTTGGACAA CAGCAGCGAA TTACCAATTC
CTCGGTGAGA ATCTGCTATC AAACGGCGCA TTTGAATTAT TCAAAGAATT TACTGTTGGT
GCCATACCTG ACGCTGCAGG TAATTCGTGT CCGTCCCGTA TGAAGTTTGA CGCATCACGT
ATTGTACCGA CTGCGTCAGA GAATCGTCCC CGCAATATCG CATTTAACTA CATCGTGAGA
GCAGCATAA
 
Protein sequence
MANLSENPQW VDGIYQIETS DPVVGGPDGV SNRQAKELAS RTRYLKKEQE KTGSDLATHA 
AAADPHTQYA PKANPTFTGT PKAPTPATDS NSQQIATTAF VRSVGATKLA KDQNGADIPD
RELFNRNLGS SRAYSSSIPI GGSDGLWTTA EFIGWLESQG AFVHAYWVCR GSWSYSHNKI
ISDTECGQIP LAGSVVEVMG QNDATTIRIT TPSTTPAGFS DSANAQFTYI YNGVDYSPGW
RRDYNTKNKP TAADIGALPE KAVAQAAAKL ATPRTINGVP FDGSANIALT PANLGLTETV
NLAAGALEKA KNGADISDKT AFYSNVTLRG TLSDGMTFAN CDKAGDYVVA INDPNTVSDM
PLYKGQKLYG YGVLHVFQHG NFVGQEYINH SGDYAWRQKW DDGINTPWVV ALSSSRVPTA
ADVGAITKTD ADSHYVHQGS SGVIYQDSDL AWDSPTGAYL KDNGTHSSLI WHMGLNAGSA
SAAQFYFDFA NGGIKYRSSR DNSGFEKPWA RIYTDQDKPT AADIGALSLN EIVGMPMPWP
QTTAPSGWLK CNGQTFDKNI YPKLAQIYPA GILPDLRGEF IRGWDDSRGV DTGRTLLSTQ
GDAIRNIVGE IWTTAANYQF LGENLLSNGA FELFKEFTVG AIPDAAGNSC PSRMKFDASR
IVPTASENRP RNIAFNYIVR AA