12 homologs were found in PanDaTox collection
for query gene Ndas_4964 on replicon NC_014211
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_014211  Ndas_4964  hypothetical protein  100 
 
 		 197 aa  384  1e-106  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.920058  normal  0.171463 
 
 
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NC_013510  Tcur_4512  RNA polymerase, sigma-24 subunit, ECF subfamily  47.92 
 
 		 597 aa  78.2  0.00000000000007  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0564894  n/a   
 
 
-
 
NC_013595  Sros_9182  RNA polymerase, sigma-24 subunit, ECF subfamily  46.34 
 
 		 628 aa  66.6  0.0000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013510  Tcur_1260  RNA polymerase, sigma-24 subunit, ECF subfamily  44.32 
 
 		 543 aa  63.2  0.000000002  Thermomonospora curvata DSM 43183  Bacteria  normal  0.0268385  n/a   
 
 
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NC_014165  Tbis_3454  ECF subfamily RNA polymerase sigma-24  46.07 
 
 		 568 aa  63.5  0.000000002  Thermobispora bispora DSM 43833  Bacteria  normal  0.0741469  normal  1 
 
 
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NC_013131  Caci_8360  RNA polymerase, sigma-24 subunit, ECF subfamily  41.77 
 
 		 433 aa  55.1  0.0000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  1 
 
 
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NC_007333  Tfu_2716  alanine-rich protein  34.52 
 
 		 344 aa  49.3  0.00004  Thermobifida fusca YX  Bacteria  normal  1  n/a   
 
 
-
 
NC_009441  Fjoh_0563  ECF subfamily RNA polymerase sigma-24 factor  21.98 
 
 		 157 aa  43.9  0.002  Flavobacterium johnsoniae UW101  Bacteria  normal  0.454582  n/a   
 
 
-
 
NC_007333  Tfu_0574  DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein  39.13 
 
 		 477 aa  43.1  0.003  Thermobifida fusca YX  Bacteria  normal  0.423328  n/a   
 
 
-
 
NC_008554  Sfum_3877  ECF subfamily RNA polymerase sigma-24 factor  32.2 
 
 		 208 aa  42.4  0.004  Syntrophobacter fumaroxidans MPOB  Bacteria  normal  1  normal  0.0377952 
 
 
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NC_013595  Sros_7652  RNA polymerase, sigma-24 subunit, ECF subfamily  39.47 
 
 		 592 aa  42.7  0.004  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  1 
 
 
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NC_013947  Snas_3042  RNA polymerase sigma-24 subunit, ECF subfamily  29.63 
 
 		 327 aa  41.6  0.007  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.278902  normal  1 
 
 
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