| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tbis_3454 |
|---|
| Symbol | |
|---|
| ID | 9169984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobispora bispora DSM 43833 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014165 |
|---|
| Strand | - |
|---|
| Start bp | 4030501 |
|---|
| End bp | 4032207 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 |
|---|
| Protein accession | YP_003654036 |
|---|
| Protein GI | 296271404 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0741469 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 63 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGATG GCGTCATGGC CGAGGCCCTC CGCGCCAGGG ATCCGGATGC CCTCGCCGCG
CTCTACGACA GGTACGCCGA ACCCATTTAT CAGTATTGCT GCGCGCTGCT CGGCGATCCC
GACAGCGCCC AGGTCGCCCT GCGGGACACG TTCATCGCCG CAGAGGCCCT CATCGGCTCG
CTCGCCGATC CCGCGATGTT CCGGCCCTGG CTGTACGCGC TCGCCCGCGG GGAGAGCCTG
CGCCGGCGGG TCCCCGGCGG GCGCGCGGCC GACGACACGA CCGGCGCGGA CGGCACCGTG
CAGCCGCCCG CCGCCGGCGA CGGCCCGGCC GGACCGCCCA CCCAGGAGGC CGGGGAGGTC
ATCGATCTGC AGGCGGTGGC GCGCAGCGCG GTGGCCGCCC TGAGCCCGGA GAACCGCGAG
ATCCTCGAGC TCACCACCCG GCACGGCCTG TCCCTCGAGG ACGTGGCCCA CATGCTCGGC
ACCGGGCGGC GCCACGTCGA GGGCTGGCAC GAGGCGGCCG CGGGTCAGCT CCGCGACCTG
ATCACCGTGG AGCTCCTCGC CCGGAGCCCG TCCCCCGAGT GCGAGGCGGT CGCCGGGATC
CTCGGGGAGA CACGCGGCGG GCTCACGCCG CAGCTCCGCG CCCGGCTCGT CAAGCACCTG
GCGCGGTGCG AGGCCTGTTC CCGCCACCGG ATGCGGCAGG TCTCGCCGGA GAAGGTCTTC
ACCCTGGTGC CGCCGGTCCG GTTGCCGGAG ACGCTGCGCG TCCGCGTGCT GAGCTGCTTC
GCCGACCCCG AGCTCGTCCC GTACCGCCGG TACGTCGCCC GCCGGGTGGG CCCGCTCGAC
CCGTCCGGCT TCCCCAAGAA GGGCACCAAG CGCGAGGGCC GCGTCGCCCA GGCGATCTCC
GGGGCGATCT CCACGGTCGC CGCCGTGGTG GCGGTCGTGC TGCTGTTCGC CCAGCTCACC
GCGGACTCGC CGTCGCCCAC GGTCGGCGCC GCCCCGCGCC AGTGGCCCAC ACCGCGCACC
ACCGCACCGA GCTCCGCCCC GTCCAGCGCC ACGCCCAGGG AGACGGCCGT GGACGTACGC
ACGAGCCGGC CGCCCGCGAC CACCCACGCC GCGACCTCCG CGGTGCCGTC CCCCGTCCTG
GCCCGGCCCG CGGCGCTGGT GCGGCCCGTC CCCCGGCCCA CGCCCGCGCC CCGGCCCAGC
GAACCGCGGC GCACCCGCCG GCCGTCCGCC TCGGCCCGGC CGACCCATCA CCCTTCCGTG
CCGTACCAGA GCCCTTCGGC CGTGCCGAGC GGGGACTTCA CCGTCACCCC GGGCCGTCCG
TGGCGGCCGC CGCGCTGGCA CCGCCCCAGG CCCTCACGTG ATCACGACCA CGGCCACGGG
AGCCCCACGC CGGACCATCG CGGGCCGTAC CACGGGCAGA CCCCGGTTCC CCGTAAGTAC
CACCGGGCGC GGTACCGCCC CTGCTGCACG CACCATCGCC CGCGGCACCC GGGATCGGGG
AACCCGCGAT TCCGGGATCG GGCGCACCGG TATGCGGCCC CGGAGCCGCG GTCCCGGCAG
CGGGAGCACC GGCCCGAGGC CCGGTCCGAT GTCCACAGGT GGACGCGGCC GCACACGGAG
CCGGTGCCGG CTCCCGCACC GCGGATGAGA GGGGGTGATC CGGGCACGCC GGCGGACGGC
GGGCCGCGGT TCCCGCACCG CAGATGA
|
|---|
| Protein sequence | MNDGVMAEAL RARDPDALAA LYDRYAEPIY QYCCALLGDP DSAQVALRDT FIAAEALIGS
LADPAMFRPW LYALARGESL RRRVPGGRAA DDTTGADGTV QPPAAGDGPA GPPTQEAGEV
IDLQAVARSA VAALSPENRE ILELTTRHGL SLEDVAHMLG TGRRHVEGWH EAAAGQLRDL
ITVELLARSP SPECEAVAGI LGETRGGLTP QLRARLVKHL ARCEACSRHR MRQVSPEKVF
TLVPPVRLPE TLRVRVLSCF ADPELVPYRR YVARRVGPLD PSGFPKKGTK REGRVAQAIS
GAISTVAAVV AVVLLFAQLT ADSPSPTVGA APRQWPTPRT TAPSSAPSSA TPRETAVDVR
TSRPPATTHA ATSAVPSPVL ARPAALVRPV PRPTPAPRPS EPRRTRRPSA SARPTHHPSV
PYQSPSAVPS GDFTVTPGRP WRPPRWHRPR PSRDHDHGHG SPTPDHRGPY HGQTPVPRKY
HRARYRPCCT HHRPRHPGSG NPRFRDRAHR YAAPEPRSRQ REHRPEARSD VHRWTRPHTE
PVPAPAPRMR GGDPGTPADG GPRFPHRR
|
|---|
| |