Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Tcur_4512 |
Symbol | |
ID | 8605872 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Thermomonospora curvata DSM 43183 |
Kingdom | Bacteria |
Replicon accession | NC_013510 |
Strand | - |
Start bp | 5113412 |
End bp | 5115205 |
Gene Length | 1794 bp |
Protein Length | 597 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_003302077 |
Protein GI | 269128707 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0564894 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATGACC GTTCCCTGGT CGAGGCCCTG CGCTCGGGCG CCCCGGAGGC GCCCGGTGCG CTTTACGACT CCTACGGCCG GCGCCTGTAC GAATACTGCT GGTTCCGGCT CGGTGACCAC GAGGCCGCCC AGGCGGCGCT GTGCGACGCC TTCATCGTGG CCGAGGCGCA CATTCGCCGG CTCCAGTCGC CCGACCGGCT CGGAGCGTGG CTGTATGCGC TGGTCAGGCG GGAATGCACG CGCCTGGCGG CCGAGGGCGC GGCCGGGGAC GGGCCCGCTC CCCCCTTCCC CGGCAAAGAT CGCGGCGGGC GGGGCGAGAC GGACCAGCGG ATCATCGCCT GGCGGGCCGT GTGGGGCATG CCCCTGCTCA GCCGGGAGGT CCTCGAACTG CAGACGCTGC ACCGGCTGCC GATGCCCGAG CTGGCCTCCG TGCTCGGCCT GCCCGACCAG GACGTCCGGG CATTGCTCGC CCGCGCCGCT GCCGACCTGG AAGAGTCGCT CGCCGCCGAG CTGCTGGCCG CCCACGGGCC ACAGGAATGC CCCGAGCCGG CCGCGATCGT GCGAGAACGG CGGGACGGGC GGGGCGCCTT GCCGCTGCCC GCGGCGGTCC GCCGGCGGCT GCTGCGGCAC GCCGCGCAGT GCGCGGCCTG CGGGGAGCTG CGGCGGCACC GCCTGACACC GGTCAACGTC TACCGCCTGC TGCCGGAGAT CACGCCTCCG GGCGCGCTGC GCGACCTGGT GCAAAACCGC ATGCGGGCCC CCGGGAGGGC CGCCTACCGG GAGGCGGTCG CCGCGCGGGC CGCCGAGTTC ACCGACGGGG CCTTCCCGGT CCAGCGCGAG GCCGAGACGC TGCCGCTGCC GCTGCCGGAC CTGCCGGAGC CGGACTCGCC GGCGCCGGAC CCCGCCGCCA CGGCCGGCGG CCGGGTGAGC CGGGCGGTCG CCGTGGCCGT GGCGGTGGGC GTGTGCCTGG CGCTGGCGGC GGTCGCGGTG GGCTGGCTGC GTTCCGGTGA TCGGCCCGCC CGCCCGCAGG CCGCCGGGCC CTCCCCGTGG TCCTCGCCGC AGGAGGAACC GCCCGCGGCG GACGTGGGCG GCGCCGGCGG CTCGGCGGGC GGGGTCGCCA AGGTGGTGCG GCTGTCCCCG ACCTGGCCGC TGGGCGCCAC CGACTCGGCC GCACCGCCCA CCGCCCTGCC GTCCCCGCCC GCCGGGCCGG CGCGTCCGGA CCGAAAGCCC GGCGGCCCGG CGGGCCGGGG CACGCTGACG GTCGCGCCCC GCCACCTGGA CCTGGGCGGC GGGTCGTCCG GCACGCTCGA GCTGACCGCG CACGGCGGCC CGGTGGACTG GTCCGCCCGC GCCGGCGGGC CGATCCGGCT GAGCAGCACG TCGGGGCGGC TGGCGGCCGG CCGGTCGGTC ACGCTCCGGC TGCGGGTGGC CCGCCGCCCC GACTCGACGG GCCGGCGGGT GGTCACCTTC CGGCCCGGCA GGCTGCGGGT CGTGGTGACC TGGCGGAAGA GCCCCGCCGG GCCCCGCCCC GGACCCAGGC CGACCAAGCC GTCCGAACCG CCCCGCACGC CCCCGACGGA CGACCCCGGC ACCCCGCCGC AGCGGCCCGG GCCGACCCGG CCCCCGACCC CGGCGCCCAC GCCGCGGCCC TCCGATCCGC CGCCGTCCGA CCCGCCCTCC TCCGAGCCGC CGCCCGCCGA CCCGCCGGAG GAGTCCGAGC CGCCGGAGGA GTCCGAGCCG CCCCCCGTGC CGGAACCGCC GCAGTCCTCC GGTCCCAGTC CGGTGCCCGA GTAG
|
Protein sequence | MNDRSLVEAL RSGAPEAPGA LYDSYGRRLY EYCWFRLGDH EAAQAALCDA FIVAEAHIRR LQSPDRLGAW LYALVRRECT RLAAEGAAGD GPAPPFPGKD RGGRGETDQR IIAWRAVWGM PLLSREVLEL QTLHRLPMPE LASVLGLPDQ DVRALLARAA ADLEESLAAE LLAAHGPQEC PEPAAIVRER RDGRGALPLP AAVRRRLLRH AAQCAACGEL RRHRLTPVNV YRLLPEITPP GALRDLVQNR MRAPGRAAYR EAVAARAAEF TDGAFPVQRE AETLPLPLPD LPEPDSPAPD PAATAGGRVS RAVAVAVAVG VCLALAAVAV GWLRSGDRPA RPQAAGPSPW SSPQEEPPAA DVGGAGGSAG GVAKVVRLSP TWPLGATDSA APPTALPSPP AGPARPDRKP GGPAGRGTLT VAPRHLDLGG GSSGTLELTA HGGPVDWSAR AGGPIRLSST SGRLAAGRSV TLRLRVARRP DSTGRRVVTF RPGRLRVVVT WRKSPAGPRP GPRPTKPSEP PRTPPTDDPG TPPQRPGPTR PPTPAPTPRP SDPPPSDPPS SEPPPADPPE ESEPPEESEP PPVPEPPQSS GPSPVPE
|
| |