| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0574 |
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| Symbol | |
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| ID | 3581272 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermobifida fusca YX |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007333 |
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| Strand | - |
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| Start bp | 654946 |
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| End bp | 656379 |
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| Gene Length | 1434 bp |
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| Protein Length | 477 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 637684264 |
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| Product | DNA-directed RNA polymerase specialized sigma subunit sigma24 -like protein |
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| Protein accession | YP_288635 |
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| Protein GI | 72160978 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.423328 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGACAGCGC CGCAGAGACC GGAGCGTCAG CAGATCAGCG AAGACCACGC GTTCGCCCTG
CTGCTGCGGC AGGGCGAAGG GTACGAACGG TGCTACGACG CTTTCGCACC CGCGCTCTAC
CGCTACTGCT GGACCCTGCT CGGCGCCGAG CAGGAGGATG CTGCGGCGGA AGCCGTCTAC
GAAACCTTCC TGGCTGCCGT CGAACTCCTC CCCCGCCTGT CCGATCCTGA CCTGTTCCGG
GCCTGGCTGT TCGCGCTCGC CCGGGCCGCC TGCGAGCGGC ACGGATTCGC CGCGCAGCCC
GCGTATGCGC ACCTCACCGT CCACAGTGAG CAGCAGCCTT TCGTTGCCGC GCTGAGCGCC
CTCCTCCCCA GCCAGCGGGA ACTGCTGGAG CTCTCCCTGC GGCACGGGCT GACCCACACC
CAGATCGCTG CCGTCCTGGG CCTCGACCCT GAAACGGTGA GCGACCTCTG CCGCTCCGCA
GCCCAGCAGG CCGCAGACCT ACTCACCGAG CAGCAGCCCG GCGGCAGTCC AGGATCCCGG
TGGTTCATCG CGGACATTCC CCTGGTCGTG AGCTCTATCG CGCTGCCCGG CCCGCCGCGT
TCCCTGCGCG CCCGAGTCAT CGCCGACTGT TCGGACGCCA CCGCAATCAC GCGGCGGGAG
CAGGCTGCTG CCCTGCTCTG CCCGCTCGGA GCCAACGGCT TCCCGCTGCC GGGGGCGCGC
GGCGCGGAAG CGGAGGCAGC CGAGCCCGTC CAGGCCGACG CGGCCGTCCC CGCGGCCTCC
GCATCTGAGG CGGACGCCTC CCCGGCTGCC GCCGAGCCCG AAACCACGGA CAGCGCTATT
GCGGGGGAGC CGCACCGGCT CTCCGGCTGG CTGGTTCCCG CCACCGCCGG TCTCGTCACC
GCGCTGGTCG CATTCAGCCT GTGGGGCCTG GGCGCGTTCA CGAACCGGCC CGGGAACGGA
ACCGCGGCCG GGACCCCGCC CCCGGTGGAC GGGGTGAGTG TCGCCCCCAT GTCCGATCAC
GTCCCCGCGA GCGCCGCCCC GGACACGGGC AAGGTGCCTT CCATCGAACT CACCGAGCCG
ACACTGGAGC CCACACCGGA AGAACCCGTC GAACCGGTGG CACCGGACAG CGTCGAGGAC
GACACTGCCG AACCCGCCGC CCCGCCAGCA GAGCCCGACC CAGCGCCTCC TGCCAGCGAA
GACGCGGCAA CGGTCGACCC TCCCGCGCCT GCTCCGCAGC AGCCTGCCCC GGCACCGCGC
GAGGAACCGG CCAGTCAGCC CCAGCCTGCT CCCACGGCGC CTGCCGCCCC CGCGCCGGCA
CCGGCTCCCG CCCAGCCCGC CCAGGAAGAC CCGCCGCCGC GCCGCCCGGG AAGCGGCGTG
ATCTCGCTCC TCGAAGGAGT CCTGGGGCTC CTCGGCTTGC ACGGCAACCG CTGA
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| Protein sequence | MTAPQRPERQ QISEDHAFAL LLRQGEGYER CYDAFAPALY RYCWTLLGAE QEDAAAEAVY
ETFLAAVELL PRLSDPDLFR AWLFALARAA CERHGFAAQP AYAHLTVHSE QQPFVAALSA
LLPSQRELLE LSLRHGLTHT QIAAVLGLDP ETVSDLCRSA AQQAADLLTE QQPGGSPGSR
WFIADIPLVV SSIALPGPPR SLRARVIADC SDATAITRRE QAAALLCPLG ANGFPLPGAR
GAEAEAAEPV QADAAVPAAS ASEADASPAA AEPETTDSAI AGEPHRLSGW LVPATAGLVT
ALVAFSLWGL GAFTNRPGNG TAAGTPPPVD GVSVAPMSDH VPASAAPDTG KVPSIELTEP
TLEPTPEEPV EPVAPDSVED DTAEPAAPPA EPDPAPPASE DAATVDPPAP APQQPAPAPR
EEPASQPQPA PTAPAAPAPA PAPAQPAQED PPPRRPGSGV ISLLEGVLGL LGLHGNR
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