13 homologs were found in PanDaTox collection
for query gene Namu_5200 on replicon NC_013235
Organism: Nakamurella multipartita DSM 44233



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013235  Namu_5200  regulatory protein, FmdB family  100 
 
 		 94 aa  188  2.9999999999999997e-47  Nakamurella multipartita DSM 44233  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013441  Gbro_0077  regulatory protein, FmdB family  46.32 
 
 		 94 aa  79.7  0.00000000000001  Gordonia bronchialis DSM 43247  Bacteria  normal  0.311805  n/a   
 
 
-
 
NC_013159  Svir_19690  putative regulatory protein, FmdB family  46.81 
 
 		 92 aa  70.1  0.000000000009  Saccharomonospora viridis DSM 43017  Bacteria  normal  1  hitchhiker  0.00850408 
 
 
-
 
NC_009077  Mjls_2300  hypothetical protein  44.79 
 
 		 96 aa  68.9  0.00000000002  Mycobacterium sp. JLS  Bacteria  normal  0.641747  normal  0.805269 
 
 
-
 
NC_014158  Tpau_1722  regulatory protein, FmdB family  44.68 
 
 		 91 aa  64.3  0.0000000006  Tsukamurella paurometabola DSM 20162  Bacteria  normal  0.85404  n/a   
 
 
-
 
NC_013172  Bfae_12110  putative regulatory protein, FmdB family  34.74 
 
 		 95 aa  56.2  0.0000002  Brachybacterium faecium DSM 4810  Bacteria  normal  0.562196  n/a   
 
 
-
 
NC_004578  PSPTO_4072  regulatory protein, putative  37.5 
 
 		 115 aa  54.3  0.0000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.443416  n/a   
 
 
-
 
NC_013169  Ksed_22410  putative regulatory protein, FmdB family  35.35 
 
 		 98 aa  52.4  0.000002  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.414075  normal  1 
 
 
-
 
NC_013757  Gobs_2156  regulatory protein, FmdB family  37.04 
 
 		 90 aa  47.8  0.00005  Geodermatophilus obscurus DSM 43160  Bacteria  normal  0.19829  n/a   
 
 
-
 
NC_007947  Mfla_1776  glutamine amidotransferase, class-II  34.33 
 
 		 124 aa  44.3  0.0006  Methylobacillus flagellatus KT  Bacteria  normal  0.0212304  normal  1 
 
 
-
 
NC_007948  Bpro_0570  regulatory protein, putative  38.24 
 
 		 113 aa  43.5  0.001  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007952  Bxe_B1705  hypothetical protein  32.84 
 
 		 132 aa  41.6  0.004  Burkholderia xenovorans LB400  Bacteria  hitchhiker  0.00591472  normal  1 
 
 
-
 
NC_012791  Vapar_3139  regulatory protein, FmdB family  43.1 
 
 		 115 aa  40  0.01  Variovorax paradoxus S110  Bacteria  normal  1  n/a   
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>