Gene Svir_19690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSvir_19690 
Symbol 
ID8387296 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSaccharomonospora viridis DSM 43017 
KingdomBacteria 
Replicon accessionNC_013159 
Strand
Start bp2100873 
End bp2101151 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content69% 
IMG OID644976032 
Productputative regulatory protein, FmdB family 
Protein accessionYP_003133814 
Protein GI257055982 
COG category 
COG ID 
TIGRFAM ID[TIGR02605] putative regulatory protein, FmdB family 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00850408 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTGACCT ACTCCTACCG GTGTCGGCAG TGCGGCGACT TCGATGTGCG GATGCCGATG 
GGTGAGGCGA CGGGTGCGTG GGCTTGTCCG TGGTGTGGGA CGTCGGCGGT TCGTCGGTTC
ACTGCTCCGC AGGTGCGGCG TGGTGATGTC GCTGTCAGGC GGGCGTATGA GTACGCCGAG
CGTAGTGCGG ATGAGCCTGA GGTGGTGTCG GCGCCTCCGC CGGCGCGGCC GCCTCGGGTG
AGTCGTGATC CTCGGCATGC GCGTCTGCCC CGGCCGTGA
 
Protein sequence
MVTYSYRCRQ CGDFDVRMPM GEATGAWACP WCGTSAVRRF TAPQVRRGDV AVRRAYEYAE 
RSADEPEVVS APPPARPPRV SRDPRHARLP RP