15 homologs were found in PanDaTox collection
for query gene Mflv_5451 on replicon NC_009339
Organism: Mycobacterium gilvum PYR-GCK



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009339  Mflv_5451  XRE family transcriptional regulator  100 
 
 
161 aa  322  2e-87  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal 
 
 
-
 
NC_008147  Mmcs_5481  XRE family transcriptional regulator  68.75 
 
 
161 aa  183  1.0000000000000001e-45  Mycobacterium sp. MCS  Bacteria  normal  normal 
 
 
-
 
NC_008704  Mkms_5881  XRE family transcriptional regulator  68.75 
 
 
161 aa  183  1.0000000000000001e-45  Mycobacterium sp. KMS  Bacteria  normal  normal 
 
 
-
 
NC_009339  Mflv_5468  XRE family transcriptional regulator  49.32 
 
 
174 aa  124  7e-28  Mycobacterium gilvum PYR-GCK  Bacteria  normal  normal  0.624713 
 
 
-
 
NC_013442  Gbro_4878  transcriptional regulator, XRE family  30.83 
 
 
181 aa  52  0.000003  Gordonia bronchialis DSM 43247  Bacteria  n/a    n/a   
 
 
-
 
NC_007644  Moth_1627  XRE family transcriptional regulator  28.33 
 
 
300 aa  45.4  0.0003  Moorella thermoacetica ATCC 39073  Bacteria  decreased coverage  0.0000000000332957  normal 
 
 
-
 
NC_013204  Elen_1445  transcriptional regulator, XRE family  35.71 
 
 
147 aa  45.8  0.0003  Eggerthella lenta DSM 2243  Bacteria  normal  0.275315  normal  0.432426 
 
 
-
 
NC_009339  Mflv_5549  XRE family transcriptional regulator  27.34 
 
 
232 aa  44.3  0.0007  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.361846  hitchhiker  0.00439273 
 
 
-
 
NC_011898  Ccel_3317  transcriptional regulator, XRE family  24.41 
 
 
281 aa  44.3  0.0007  Clostridium cellulolyticum H10  Bacteria  hitchhiker  0.0000786405  n/a   
 
 
-
 
NC_007644  Moth_1827  XRE family transcriptional regulator  33.02 
 
 
252 aa  42.7  0.002  Moorella thermoacetica ATCC 39073  Bacteria  normal  0.0400601  normal 
 
 
-
 
NC_010465  YPK_3955  hypothetical protein  28.79 
 
 
400 aa  41.6  0.004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009338  Mflv_1855  XRE family transcriptional regulator  37.29 
 
 
97 aa  41.6  0.005  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.60085  normal 
 
 
-
 
NC_012034  Athe_2435  transcriptional regulator, XRE family  34.62 
 
 
105 aa  41.2  0.006  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_46710  putative transcriptional regulator  34.51 
 
 
216 aa  40.8  0.009  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.0037508  decreased coverage  0.000000167672 
 
 
-
 
NC_014148  Plim_4072  helix-turn-helix domain protein  37.5 
 
 
380 aa  40.4  0.009  Planctomyces limnophilus DSM 3776  Bacteria  normal  n/a   
 
 
-
 
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