Gene PA14_46710 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPA14_46710 
Symbol 
ID4383073 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas aeruginosa UCBPP-PA14 
KingdomBacteria 
Replicon accessionNC_008463 
Strand+ 
Start bp4162977 
End bp4163627 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID639326321 
Productputative transcriptional regulator 
Protein accessionYP_791886 
Protein GI116049312 
COG category[K] Transcription 
COG ID[COG1476] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.0037508 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.000000167672 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGAAGAGG TCCGGCAGTG GGAAGCAGCC CGATGGACTG CGGGAAACGG GATGTGCACT 
ATAATGCGCA AAACCGCGAC AGTGAGCAAT ATATTGCCCA GCCCTACCGA ACGCCCCAGC 
GTCCTCGAAC ATGTCTCCGG CAACGTCCGC CGCCTGCGCC TGCAAGCCGG CCTCAGCCAG 
GAAGCGCTGG CCCGCGCGGC CAGTGTCAGC CGGCGGATGC TGGTGGGCAT CGAGAGCGGC 
GACGTCAATG TCAGCCTGTC GACCCTCGAC CGTATCGCCG CCGCCCTCGG CGTGCTGTTC 
CCCGACCTGG TCCAGGCCCC GGCCACCGAC CGCTCGCGGA TCAATGCGGT GGCCTGGGTC 
GGCCACCACC CCGAGAGCCG CGCCACCCTC CTCGCCAGCG CACCGGCGCG GCGCGAGGTG 
GAACTCTGGG CCTGGTCGCT GGGACCGGGC GAGCGCTACG TATCGGAACC CGACGCCGCC 
GGCTGGCGGG AGATGGTTCT GGTCATCGAA GGTCGCCTGC GCCTGGAACT GGCCGACGGC 
GAACGGCGCA TCGAGGCCGG CGACTTCCAT GCCTTCGCCA GCGACCAGCC GTACGCCTAC 
GTCAACGATG GGGACGAGGT GGTGCGTTTC ACCCGCAACG TGGTGAGCTA G
 
Protein sequence
MEEVRQWEAA RWTAGNGMCT IMRKTATVSN ILPSPTERPS VLEHVSGNVR RLRLQAGLSQ 
EALARAASVS RRMLVGIESG DVNVSLSTLD RIAAALGVLF PDLVQAPATD RSRINAVAWV 
GHHPESRATL LASAPARREV ELWAWSLGPG ERYVSEPDAA GWREMVLVIE GRLRLELADG 
ERRIEAGDFH AFASDQPYAY VNDGDEVVRF TRNVVS