| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plim_4072 |
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| Symbol | |
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| ID | 9140792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Planctomyces limnophilus DSM 3776 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014148 |
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| Strand | - |
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| Start bp | 5228092 |
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| End bp | 5229234 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | |
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| Product | helix-turn-helix domain protein |
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| Protein accession | YP_003632082 |
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| Protein GI | 296124304 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGGTA CCACTGATAA GATCATTCCC AGTTCAGTCA TTATACTGAC ATCTTATGGC
ACGATCATGA CATACCCGAT ATCGGCGAAT CAAGTCCGCA AATTCCGGCT TCTGGCAGGA
CTGACACAAC AGCAGCTCGC GGAGCAGTCG GGAATTTCTC GTACTGCCGT GACTGCGATT
GAAGGTGCCA AACTGGTTCC ATCTGTTGCA GCCGCTCTGG CGTTATCACG AACTTTGGGG
GCCAGCGTTG AAGATCTGTT TGACAGTTCC CCAATCAACA TGCCGCCAAA ACGACCCGTC
TGGGCCTGGC AACCGCCTTC CTTCTGGCAG ACATCGACAG ACGAAACACC TCATTTTCTG
GCAGAAGTCG GCGGGGAGTT GATTCAATAC CCCGCCTCCG CACGACCCGT CACCACACCC
TGGCCGGTTA TTGGCACTCA GGAGACGAAC CACGATCCAT CCCGGACACT TGTTCTCGCA
GGGTGCGATC CCGCAGCAGG CCTGCTTGCA GAAAAATTTG CTCTCGATAC CGGAATGCAT
CTCCTGGTCA TTCCACGATC CAGTCGGGCT GCTCTCGATC TGGTCGCGCA GGGCAAAGCT
CATCTGGCAG GCCTGCATTT TTCGTCGCCT GAGACACCGG ATGGAAATGT CCAACTCGCC
CGGGAATCGC TCGACAAAGG ATTCGCCCTG TTAAGACTTG CGAACTGGGA CGAGGGGGTT
GCTGTTCAAC CTGCTGCAAA ACTAAAAACT CTGGTAAGTA TTCAGAAGAG CCGTCTGACA
TGGGTCGGGC GCGAACAAGG TTCGGGAGCC CGCCGCTGTT TCGATCAGTT GTTCCATGGC
AAGAAAAAAC CCGCCCACGA AGTCCATAAC CATCGTGCGG TCGCCGAAGC GATTCGATCA
GGTTTTGTGA ATGCGGGGAT CTGTCACAAA CTGGCGAGTG CAGAAGCAGG TCTCGACTTT
CTTCCCGTGC AGCAGGAAGC TTATGACCTT TGTATTCCGG AGGCTTACTT TGATGATGAT
CGAGTACAAT GCCTGATTCG CGTAGTGCAA TCGACCTCGT ACCGCAAGGT GATGGCACAG
CTTCCGGGTT ATGACACTTC AGAAACTGGT GGAATCTCTC ACTACATGGT GACTCATCGC
TAA
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| Protein sequence | MAGTTDKIIP SSVIILTSYG TIMTYPISAN QVRKFRLLAG LTQQQLAEQS GISRTAVTAI
EGAKLVPSVA AALALSRTLG ASVEDLFDSS PINMPPKRPV WAWQPPSFWQ TSTDETPHFL
AEVGGELIQY PASARPVTTP WPVIGTQETN HDPSRTLVLA GCDPAAGLLA EKFALDTGMH
LLVIPRSSRA ALDLVAQGKA HLAGLHFSSP ETPDGNVQLA RESLDKGFAL LRLANWDEGV
AVQPAAKLKT LVSIQKSRLT WVGREQGSGA RRCFDQLFHG KKKPAHEVHN HRAVAEAIRS
GFVNAGICHK LASAEAGLDF LPVQQEAYDL CIPEAYFDDD RVQCLIRVVQ STSYRKVMAQ
LPGYDTSETG GISHYMVTHR
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