26 homologs were found in PanDaTox collection
for query gene Lferr_2014 on replicon NC_011206
Organism: Acidithiobacillus ferrooxidans ATCC 53993



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_011761  AFE_2384  hypothetical protein  100 
 
 		 290 aa  599  1e-170  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  1  n/a   
 
 
-
 
NC_011206  Lferr_2014  ABC-type phosphate/phosphonate transport system periplasmic component  100 
 
 		 290 aa  599  1e-170  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.744001  normal  1 
 
 
-
 
NC_010524  Lcho_2109  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  37.55 
 
 		 257 aa  177  2e-43  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.734617 
 
 
-
 
NC_007484  Noc_1486  ABC-type phosphate/phosphonate transport system periplasmic component  31.43 
 
 		 248 aa  162  6e-39  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000364049  n/a   
 
 
-
 
NC_010524  Lcho_0660  ABC-type phosphate/phosphonate transport system periplasmic component  32.46 
 
 		 248 aa  137  2e-31  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  1 
 
 
-
 
NC_008781  Pnap_2811  ABC-type phosphate/phosphonate transport system periplasmic component  29.96 
 
 		 249 aa  124  1e-27  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.397411  decreased coverage  0.00000037671 
 
 
-
 
NC_009457  VC0395_A0608  hypothetical protein  27.19 
 
 		 270 aa  75.5  0.0000000000009  Vibrio cholerae O395  Bacteria  normal  1  n/a   
 
 
-
 
NC_011146  Gbem_2154  periplasmic binding protein-related protein  24.14 
 
 		 281 aa  67.8  0.0000000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.365031  n/a   
 
 
-
 
NC_008577  Shewana3_2014  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.01 
 
 		 300 aa  65.1  0.000000001  Shewanella sp. ANA-3  Bacteria  normal  0.440598  hitchhiker  0.00720049 
 
 
-
 
NC_012918  GM21_2069  periplasmic binding protein-related protein  23.58 
 
 		 281 aa  60.5  0.00000003  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000112827 
 
 
-
 
NC_008576  Mmc1_3599  periplasmic binding protein-related protein  22.18 
 
 		 294 aa  56.6  0.0000005  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012791  Vapar_2055  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.36 
 
 		 285 aa  52  0.00001  Variovorax paradoxus S110  Bacteria  normal  0.065858  n/a   
 
 
-
 
NC_007948  Bpro_4807  periplasmic binding protein-related protein  22.32 
 
 		 256 aa  52  0.00001  Polaromonas sp. JS666  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010730  SYO3AOP1_0192  hypothetical protein  20.57 
 
 		 207 aa  51.6  0.00001  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_009901  Spea_1433  phosphonate ABC transporter, periplasmic phosphonate-binding protein  20.11 
 
 		 287 aa  51.6  0.00002  Shewanella pealeana ATCC 700345  Bacteria  normal  1  n/a   
 
 
-
 
NC_010730  SYO3AOP1_0011  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  20.33 
 
 		 952 aa  50.4  0.00003  Sulfurihydrogenibium sp. YO3AOP1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013422  Hneap_0681  diguanylate cyclase/phosphodiesterase  25.93 
 
 		 932 aa  49.3  0.00007  Halothiobacillus neapolitanus c2  Bacteria  normal  1  n/a   
 
 
-
 
NC_011138  MADE_03494  ABC-type phosphate/phosphonate transport system, periplasmic component  18.97 
 
 		 274 aa  48.9  0.0001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  1  n/a   
 
 
-
 
NC_008576  Mmc1_3535  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.62 
 
 		 283 aa  47.8  0.0002  Magnetococcus sp. MC-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_011126  HY04AAS1_1320  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  20.83 
 
 		 434 aa  46.6  0.0005  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  1  n/a   
 
 
-
 
NC_008228  Patl_1536  phosphonate ABC transporter, periplasmic phosphonate-binding protein  22.08 
 
 		 274 aa  45.1  0.001  Pseudoalteromonas atlantica T6c  Bacteria  normal  1  n/a   
 
 
-
 
NC_010814  Glov_0044  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  28.57 
 
 		 290 aa  43.9  0.003  Geobacter lovleyi SZ  Bacteria  normal  1  n/a   
 
 
-
 
NC_007908  Rfer_1615  phosphonate-binding periplasmic protein  20.36 
 
 		 287 aa  44.3  0.003  Rhodoferax ferrireducens T118  Bacteria  normal  1  n/a   
 
 
-
 
NC_010002  Daci_2013  hypothetical protein  28.44 
 
 		 322 aa  43.9  0.003  Delftia acidovorans SPH-1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_007298  Daro_1826  phosphonate-binding periplasmic protein  21.35 
 
 		 293 aa  43.1  0.005  Dechloromonas aromatica RCB  Bacteria  normal  1  normal  0.129671 
 
 
-
 
NC_007948  Bpro_2236  phosphonate-binding periplasmic protein  21.68 
 
 		 289 aa  43.1  0.005  Polaromonas sp. JS666  Bacteria  normal  1  normal  0.366472 
 
 
-
 
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