Gene Daci_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_2013 
Symbol 
ID5747572 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp2199659 
End bp2200627 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content71% 
IMG OID641297093 
Producthypothetical protein 
Protein accessionYP_001563038 
Protein GI160897456 
COG category[S] Function unknown 
COG ID[COG3181] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGACTGC CCCACGCCAT CGCCACGCTG CTCGCGGGCT GCGCCATCAC CATCGCCATC 
GCCGGCACGG CCTGGAGCCG CCAGCCGCTC AGGCTCATCG TTCCCGCACC GCCGGGCGGC
ACCATGGACA TCGTGGCGCG CGTCGTGGGC CAGCAGCTCG CGTCTGAAAC AGGCCAGGCC
GTGGTGATAG ACAACCGCCC GGGCGCAGGC GGCCTGCTGG GCATGCAGAC CCTGCTGCAG
GCGCCCGCCG ATGGGCAGAC GCTGCTGGTG GGCGCAAGCA ATCTGCTGGC AGAGATCCCC
CATGTGATCA AGATGCCCTT CGATCCGCTC AAGGACCTGG TGCCCCTGGC CTCGCTGGCC
CGCTCGGGCG TGGTGCTGGT GGCCGCGGCC AGCCAGCCCG CCCAGGACTT GCAGGAGCTG
CTCGCGCAGC TCAAGGCACG CAAAGGCCAG ACCAGCTTTG CCAGCTACAG CCCCGGCACC
GTGTCGCACT ACGCCGGCCT GATCCTCAGC GACAGGGCGG GCCTGGACCT GCAGCACGTG
GGCTACGCGG GCTCGCCGCC GGCCGTGCAG GCCCTGCTGG GCGGTCAGGT GGACGTCATG
TTCGACGGCA TGCTGACCTC GGTGCCCCTG ATCAGGGCCG GCAAGCTGCG TGCCTACGCG
TTCTCCGGCC CCCGGCGTTC GCGCCACCTG CCCCAGGTGC CGACCACCGC CGAACTCGGC
TACCCCGAGC TGCAGTTTCG CGGCTGGGTG GGCCTGATCG CGCCGGCCCG CCTGCCGACC
GAAACCATGG AACGCCTGCG CGCCGCCATC GGGAAAGCCG CCAGCGCGCC GGCCGTGCAG
CAAAAGCTCT CCGACGTGGG GCTGGAGCCC GAGGTGCTCA CCGACACCGC CGCGCTGCAG
CGCGAGACAC GCCAGATGTC CGAGCGCAAC GCCGGCATCG TGAAGAAATA CCAGATCACC
GCGAACTGA
 
Protein sequence
MRLPHAIATL LAGCAITIAI AGTAWSRQPL RLIVPAPPGG TMDIVARVVG QQLASETGQA 
VVIDNRPGAG GLLGMQTLLQ APADGQTLLV GASNLLAEIP HVIKMPFDPL KDLVPLASLA
RSGVVLVAAA SQPAQDLQEL LAQLKARKGQ TSFASYSPGT VSHYAGLILS DRAGLDLQHV
GYAGSPPAVQ ALLGGQVDVM FDGMLTSVPL IRAGKLRAYA FSGPRRSRHL PQVPTTAELG
YPELQFRGWV GLIAPARLPT ETMERLRAAI GKAASAPAVQ QKLSDVGLEP EVLTDTAALQ
RETRQMSERN AGIVKKYQIT AN