| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hneap_0681 |
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| Symbol | |
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| ID | 8533817 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Halothiobacillus neapolitanus c2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013422 |
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| Strand | + |
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| Start bp | 743246 |
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| End bp | 746044 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 646383068 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_003262579 |
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| Protein GI | 261855296 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGCAAT CAGTGCACCT TGAAACAAAA GCATGTTATG GGCCTCGACA GTGGGTCGTT
AAGGTGCTTT GGTGCAAAAA TATCCCTTTT TTTCGTGTAC TGCTGTCCTT GTTCCTGTTT
GTCTCGTCAG TTTCTGGCGT TCAGGCGGCG GAACCAACCC AAACGACCGA CAAGGTCATT
CAAATCGGCG TATTGGCCTA TCAGGGAAAA GCGCAAACGG CGCGTCGCTG GGATTCAACC
GCTGCGTATC TGAGTGAGAA AAATCCCGGC TATTCCTTTC ATATAGAGCC AATGTTCCTG
TCCGAGCTTG CCGCCGCCGT GCGGGAAAAC CGCCTCGACT TCGTGCTCAC TCAGCCCTTG
CAGTTTGTGC AACTGGCTCA AAATGATGAT GTCTGGCCAT TGGCTACCAT GGTTGTTAAA
ACACCTGGCG GCACGCTGAA TCGGTTTGGT TCGGCCATTA TTGTGCGTGC CGATCGAAGC
GATCTTCAAC ATGTCTCTGA TTTGAAAAAC AAAATAGTGG CTGGTGCGTC CAAAGATGCA
TTGGGCGCGT GGTTACTGGG TCTTGATACT CTGGTCCGTG CAGGGATCGA TCCCAAAACG
CAAATTCAAC CCCTGTTCAC CGGCTTGCCG ATGTTTCAGA TTGTGGAGGC CGTTTGGCAG
CACCGCGCCG ATGCGGGCGT AATACGCGCC GGATTTCTAG AACAGCTTGA GTCACAAGGT
GCTGTAAAAA AGGGTGAATT CCGGGTTCTC GACCCTAGTC AGTACAGTGA TTATCCCTAT
CTGGTTTCAA CCGAGCTTGT GCCCGAATGG CCGTTTTCTG CGACAAGTAG CGTGGATCGA
GTGTTTGCCG AAAAGGTAGC CCGGGACTTG ATGGGGATGA CGCCTGATAA CCCCGCATTA
ATTTCAAGTG GAATCAGCAA GTGGGCATTG CCGCTGGATT ACTCGACTGT TCAGCAAATA
AGGGATCGCT GGTTGCCAGG CGACACGTCG CTTATCGTTT TATTCAAGTC ATACGGTTGG
TGGTTGCTTC TGCCTATTGG CTTGATGCTC CTTGTTTTTT TTCTGCAAGG TAAACGAACG
CAGAAAAAAA TAGCACGCCA GGAAATTCAG CTGAGGAAAA CACTCAATGC GCTGGAAGAT
TCGGTTGTTG TTCTGTCGCT GGATGGCCGC GTGTTATTCG CCAATCAACC CAGTCGACAG
CTTTTGAGAC ATCCCGTTGA ACACACCGAC GAGTTGAGTG GGCGACATTA CACGGTACTT
TTCGATCTTC GTTGGCGTGA ATCCGACCCC AACTTCGATC TGCGAACGGC CATCGGTTTA
TTGTGCAAGC GTCCCGAGCA ATCCTACAGT TTGCAATTGT CTGTTGGACA CCAGATCAAG
GACATCGATG TTCACCTTCG TCTGCTTGGA TCGTGCTTGG ATAAGCTGTC ATCAAAAATC
ATCCTCACGC TGCGCGATGT GACCGACTAT CGAGAAGCGA CGGCCTTGCT GGCCTACCGG
GCCAGCCATG ATCGACTCAC GGGGTTGCTC AACCTCGCTT CTTTTGCGGA CTTCCTCGAA
ACCCAGTGCA ATGTCCTTGA ACAAAAGAAA AGTGAAGGAT TGATTCTTTG GCTCGATGTG
GATGACTTCC GGCTCATCAA TGAGACTAAT TCACGTTCTG CCGGGGATCA GGTTGTTGCC
CGTATCGCAA GTTTTTTGAG TTTTTCTGTG CCGCCAACGG GCGTTATTGC GCGACTGGGG
GTTGACGAAT TCGGGGTTTG GATTCCGGAC GTGCAATCCT TCCCTTATCA GCAATGGCCG
GATGAGTTGC TGAGCGGCTT GCAGGATATG CGTTTCGAGA TTGGCGATCA GCGGCTCCGA
GTGAGTGTCA GCATGGGTGC GTGTCTGGCT GATTATCGAT TGGGTGCTGA TCTGCTGAAT
GATGCTGAAG CAGCCTGTCG GCGGGCGCAT CGCGAGGGCG GTAATCGGGT GGTCTGGTTC
TCTCGTGATG ATCAGGAAAT CGAATCCAGA CGCCATCAAC TGGCCACCTT GCACCAACTC
AAACAGGCTC TGGATGAAGA GGGGTTGATG CAGGTGATTC AGGCCATTGT GCCGCTGCCG
CTCCCTTCTG CCAATCAGGC GCTCCTGCCG CATTATGAGG TGCTGTTGCG GTTGCGCGGT
GCGGATGGCA GCCTGCAATC GCCGGTGCAG TTCATCGAAG CGGCAGAAAA ATACCACTTT
ATGTCCGAAA TCGATCGGTG GGTTATACGC CAGACGTTCG CACTGTTGAC GCGTTGCGGG
AAAAACCCGC CACTGCTTGC CATCAATCTC TCCGGCGCAA CAGTGCAGGA TCCATCGATG
AACGCGTTCA TCCGTTCTGC TTTCCGTGAG TTCAATCTCG ATCCAGCCTT GATCTGTTTC
GAGATTACCG AAACCTCCGC TATCACTAAT TACGAATTGG TGTTGGAACT GGTCCATTCG
TTACGTCAGT TGGGCTGCAA GATCTCGCTC GATGACTTCG GTGCGGGGTT ATTGTCTTTC
GAATTCATGC GTCGTTTGCA GCCGGATTTC GTCAAAATCG ATGGCAAGCT GGTTCGTGAC
ATCGAGCATG ACCCGGTCGC CTCGGTCATC GTCAGGGCCA TTCAGCAGGT ATCGGAAGTG
ATGGGTGCCA AAACGATTGG CGAGTGGGTC GAGAACGAGG CCACCTTGCG CCGGTTGGAG
GCCATCGGTA TCGATTTCAT CCAGGGTTAT TACTACCACG CGCCGGTTCC CATCGAGACC
TTGATCCAGG AACCGTTGAT TCATCAATTG CCCGACTGA
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| Protein sequence | MTQSVHLETK ACYGPRQWVV KVLWCKNIPF FRVLLSLFLF VSSVSGVQAA EPTQTTDKVI
QIGVLAYQGK AQTARRWDST AAYLSEKNPG YSFHIEPMFL SELAAAVREN RLDFVLTQPL
QFVQLAQNDD VWPLATMVVK TPGGTLNRFG SAIIVRADRS DLQHVSDLKN KIVAGASKDA
LGAWLLGLDT LVRAGIDPKT QIQPLFTGLP MFQIVEAVWQ HRADAGVIRA GFLEQLESQG
AVKKGEFRVL DPSQYSDYPY LVSTELVPEW PFSATSSVDR VFAEKVARDL MGMTPDNPAL
ISSGISKWAL PLDYSTVQQI RDRWLPGDTS LIVLFKSYGW WLLLPIGLML LVFFLQGKRT
QKKIARQEIQ LRKTLNALED SVVVLSLDGR VLFANQPSRQ LLRHPVEHTD ELSGRHYTVL
FDLRWRESDP NFDLRTAIGL LCKRPEQSYS LQLSVGHQIK DIDVHLRLLG SCLDKLSSKI
ILTLRDVTDY REATALLAYR ASHDRLTGLL NLASFADFLE TQCNVLEQKK SEGLILWLDV
DDFRLINETN SRSAGDQVVA RIASFLSFSV PPTGVIARLG VDEFGVWIPD VQSFPYQQWP
DELLSGLQDM RFEIGDQRLR VSVSMGACLA DYRLGADLLN DAEAACRRAH REGGNRVVWF
SRDDQEIESR RHQLATLHQL KQALDEEGLM QVIQAIVPLP LPSANQALLP HYEVLLRLRG
ADGSLQSPVQ FIEAAEKYHF MSEIDRWVIR QTFALLTRCG KNPPLLAINL SGATVQDPSM
NAFIRSAFRE FNLDPALICF EITETSAITN YELVLELVHS LRQLGCKISL DDFGAGLLSF
EFMRRLQPDF VKIDGKLVRD IEHDPVASVI VRAIQQVSEV MGAKTIGEWV ENEATLRRLE
AIGIDFIQGY YYHAPVPIET LIQEPLIHQL PD
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