Gene Lferr_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagLferr_2014 
Symbol 
ID6878005 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 53993 
KingdomBacteria 
Replicon accessionNC_011206 
Strand
Start bp2017443 
End bp2018315 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content54% 
IMG OID642789886 
ProductABC-type phosphate/phosphonate transport system periplasmic component 
Protein accessionYP_002220438 
Protein GI198284117 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.744001 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCTC CTAAAATCTC CAGTGAGGCC ACCCTGAACT TTACGGTAGA TCCGAATTAC 
TCCGGAAAGA ATCTCCCGGG ATGGTTTTTG ATGAACACCT ATCTGCAGCG GCATCTGGGT
CAGATAATGC ATTTCCAGCC GTATGACGGC TTTGACGCCT GTCGCGCCGC AGTGCTCGAC
AACCAATACG ATCTGGTTTA CGCCAACCCA TTCGACTGGG TGCAATACGT ACAAAAGAGG
GATTTTATAC CCATCGCCAA ACCCCGGGAT CATTTTGATG AAGTATACTT ATGCACCGCA
GCGGTCGGTC CGGTACGGGA GATTGCGGAT TTGTCGCCGC GTATCCGCAT AGCCTCCGCC
CATCCCGCCA CACTAGTTCA CATGGTGGGG TTGTTTCTGC TGGATAAAGC GGAGATCGAC
CGGGCACGCC TGGAATTCGT CTTTACGGGC AGTTACCAGG GGGTGCTCAA GGCCATACTA
CAGGGGCAGG CGGATGTCGG TTTTTTGTTT GACGAAGTCT ATACCAGTGC AAGCAGCCTG
ATTCGTGATC ATCTGCGCAT CATAGACCGT TCTGACGATG CCTTCGCGTT CCATGCATTC
TGTGTTGGCC CACGATTATC CGCGCAGCGG GATCTGCTTA CCCGGATACT TTGCCAAATG
GACCAGGAGA CGCGGGGGCA GGTATTATTG CAGGATGTCG GTTTTTCCGG TTTTGTGCCG
GTAAGCGCCG AAGAAGTGGC GTGCCTGACC ATGCTTACCG AAGAATACAT CAGCGGCCAC
GAGGCCATCG ATCTGCGCAC GACTTCGTCT CTGGCCATCG ATGACAGTGC CTTTGTCGTT
GCCCGTGAGG ATCCCGATAG CGGGACAAAC TAA
 
Protein sequence
MPSPKISSEA TLNFTVDPNY SGKNLPGWFL MNTYLQRHLG QIMHFQPYDG FDACRAAVLD 
NQYDLVYANP FDWVQYVQKR DFIPIAKPRD HFDEVYLCTA AVGPVREIAD LSPRIRIASA
HPATLVHMVG LFLLDKAEID RARLEFVFTG SYQGVLKAIL QGQADVGFLF DEVYTSASSL
IRDHLRIIDR SDDAFAFHAF CVGPRLSAQR DLLTRILCQM DQETRGQVLL QDVGFSGFVP
VSAEEVACLT MLTEEYISGH EAIDLRTTSS LAIDDSAFVV AREDPDSGTN