20 homologs were found in PanDaTox collection
for query gene Noc_1486 on replicon NC_007484
Organism: Nitrosococcus oceani ATCC 19707



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_007484  Noc_1486  ABC-type phosphate/phosphonate transport system periplasmic component  100 
 
 
248 aa  510  1e-144  Nitrosococcus oceani ATCC 19707  Bacteria  hitchhiker  0.000364049  n/a   
 
 
-
 
NC_010524  Lcho_0660  ABC-type phosphate/phosphonate transport system periplasmic component  49.6 
 
 
248 aa  275  5e-73  Leptothrix cholodnii SP-6  Bacteria  n/a    normal 
 
 
-
 
NC_008781  Pnap_2811  ABC-type phosphate/phosphonate transport system periplasmic component  38.31 
 
 
249 aa  195  5.000000000000001e-49  Polaromonas naphthalenivorans CJ2  Bacteria  normal  0.397411  decreased coverage  0.00000037671 
 
 
-
 
NC_011761  AFE_2384  hypothetical protein  31.43 
 
 
290 aa  162  4.0000000000000004e-39  Acidithiobacillus ferrooxidans ATCC 23270  Bacteria  normal  n/a   
 
 
-
 
NC_011206  Lferr_2014  ABC-type phosphate/phosphonate transport system periplasmic component  31.43 
 
 
290 aa  162  4.0000000000000004e-39  Acidithiobacillus ferrooxidans ATCC 53993  Bacteria  normal  0.744001  normal 
 
 
-
 
NC_010524  Lcho_2109  ABC-type phosphate/phosphonate transport system periplasmic component-like protein  27.27 
 
 
257 aa  125  6e-28  Leptothrix cholodnii SP-6  Bacteria  n/a    normal  0.734617 
 
 
-
 
NC_009457  VC0395_A0608  hypothetical protein  25.97 
 
 
270 aa  74.7  0.000000000001  Vibrio cholerae O395  Bacteria  normal  n/a   
 
 
-
 
NC_008228  Patl_1536  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25 
 
 
274 aa  63.9  0.000000002  Pseudoalteromonas atlantica T6c  Bacteria  normal  n/a   
 
 
-
 
NC_008577  Shewana3_2014  phosphonate ABC transporter, periplasmic phosphonate-binding protein  27.5 
 
 
300 aa  62.4  0.000000006  Shewanella sp. ANA-3  Bacteria  normal  0.440598  hitchhiker  0.00720049 
 
 
-
 
NC_012918  GM21_2069  periplasmic binding protein-related protein  25.99 
 
 
281 aa  55.5  0.0000008  Geobacter sp. M21  Bacteria  n/a    hitchhiker  0.0000000000000112827 
 
 
-
 
NC_011146  Gbem_2154  periplasmic binding protein-related protein  25.55 
 
 
281 aa  53.9  0.000002  Geobacter bemidjiensis Bem  Bacteria  normal  0.365031  n/a   
 
 
-
 
NC_007298  Daro_3685  periplasmic binding protein-related protein  23.2 
 
 
285 aa  53.9  0.000003  Dechloromonas aromatica RCB  Bacteria  normal  0.758241  normal 
 
 
-
 
NC_009831  Ssed_2942  phosphonate ABC transporter, periplasmic phosphonate-binding protein  25.25 
 
 
306 aa  53.5  0.000003  Shewanella sediminis HAW-EB3  Bacteria  normal  normal 
 
 
-
 
NC_009901  Spea_1433  phosphonate ABC transporter, periplasmic phosphonate-binding protein  23.12 
 
 
287 aa  53.1  0.000004  Shewanella pealeana ATCC 700345  Bacteria  normal  n/a   
 
 
-
 
NC_011138  MADE_03494  ABC-type phosphate/phosphonate transport system, periplasmic component  23.98 
 
 
274 aa  51.6  0.00001  Alteromonas macleodii 'Deep ecotype'  Bacteria  normal  n/a   
 
 
-
 
NC_010506  Swoo_1703  phosphonate ABC transporter, periplasmic phosphonate-binding protein  24.37 
 
 
306 aa  50.4  0.00002  Shewanella woodyi ATCC 51908  Bacteria  normal  normal 
 
 
-
 
NC_007948  Bpro_4807  periplasmic binding protein-related protein  21.68 
 
 
256 aa  48.1  0.0001  Polaromonas sp. JS666  Bacteria  normal  normal 
 
 
-
 
NC_008576  Mmc1_3599  periplasmic binding protein-related protein  20.5 
 
 
294 aa  46.6  0.0003  Magnetococcus sp. MC-1  Bacteria  normal  normal 
 
 
-
 
NC_011126  HY04AAS1_0208  diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)  24.87 
 
 
947 aa  44.3  0.002  Hydrogenobaculum sp. Y04AAS1  Bacteria  normal  n/a   
 
 
-
 
NC_007298  Daro_0241  periplasmic binding protein-related protein  23.73 
 
 
276 aa  43.5  0.004  Dechloromonas aromatica RCB  Bacteria  normal  normal 
 
 
-
 
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