Gene Pnap_2811 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnap_2811 
Symbol 
ID4687375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas naphthalenivorans CJ2 
KingdomBacteria 
Replicon accessionNC_008781 
Strand
Start bp2955913 
End bp2956662 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content61% 
IMG OID639835819 
ProductABC-type phosphate/phosphonate transport system periplasmic component 
Protein accessionYP_983034 
Protein GI121605705 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.397411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000037671 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCTCA ATTTTCTGAT CGCCCCTGAT TTTTCCCCCG AGCGTTTTGC CGGCTGGCAC 
ATGCTCAACA CGCTGCTGCA GCGTCGCTCC GGCATTCACC TTCACCTGCT GACCCCGGCG
AGTCCGGCCG AACAGGCGGC CCTGCTGGCC GAGGGCAAAG TCGATATGGT GTATGCCAAC
CCGTTTGATG CTGCCGACAT GATCCGCAGC CAGGGTTATG TACCGTTCGC ACGGCCAGCC
GAGCGGTTTG ACGAGATGGT GATTGCCACC GGGTCTGAAT CCAGTCTGCA AAAGCTGGAG
GACATCCAGC CCGGCAGCCG CATTGCGCTG ACGGACAACA AGGACGTCAA GCTGATTGGC
TTGCGCCTGC TGGAGCCAGC CGACCTGAAC GAGTCGCTGA TCGAGTGGGT TCCGGTGGAG
AGTTTTCAGG CCGTTGCGCG CCTGACCATC AAGGGCGGGG TGCAGGCCGG TTTTTTCCTG
GCCGAAGCCT ATGCGTCGCT CACCCGCATG ACGCGCAGCC AGCTGCGCGT TCTGGTGGAA
AGCAGGATCA GCGACATCTC GCATGTGGTG CTGGCGCACC CGCGCATGGC TGGCGACTTG
CCGCGCCTCA GCGAAGCCTT GCTGGGTATC GGGCGCGAGC CTGCTGACAG CGACGTGCTT
GAGGCACTCG GTATTCCCAA GGGGTTTGAA GCGATGACCC AGGAAGATGC GGAATTCATG
ATAGACCTGA TGGACACGCT TCTTGACTGA
 
Protein sequence
MTLNFLIAPD FSPERFAGWH MLNTLLQRRS GIHLHLLTPA SPAEQAALLA EGKVDMVYAN 
PFDAADMIRS QGYVPFARPA ERFDEMVIAT GSESSLQKLE DIQPGSRIAL TDNKDVKLIG
LRLLEPADLN ESLIEWVPVE SFQAVARLTI KGGVQAGFFL AEAYASLTRM TRSQLRVLVE
SRISDISHVV LAHPRMAGDL PRLSEALLGI GREPADSDVL EALGIPKGFE AMTQEDAEFM
IDLMDTLLD