| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | HY04AAS1_0208 |
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| Symbol | |
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| ID | 6742997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Hydrogenobaculum sp. Y04AAS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011126 |
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| Strand | - |
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| Start bp | 185773 |
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| End bp | 188616 |
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| Gene Length | 2844 bp |
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| Protein Length | 947 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 642749998 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_002120878 |
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| Protein GI | 195952588 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGAGT TTAGGGTTTG TCCCCATGAT ACACAAAAAG GACTTGACAA ATGGCTTAAT
ATAGCTAAAA AGATAAAAGA AATTTTTGGC CAAGAGGTGG AGCTTAAGCC TTTTAAAAAC
TTTGACGAAG AATACGCTTA TTTTTCTAAG GACGATTTTA AACCAGATAT TTATTACGCA
AGCTTTGATA TGACGCTTTT GCTTTTAGAT AAGGGCTATA AGATCATAGG CAAATTTAAA
AATGAAAATG ATGTTTTTTT GTTGGTAAGC CGAAAAAAGT TTAACGATGA AGAACCAAGC
AATATAACAA TTGTAGATAA GCTAAATTCT TTTTATGTCT TATACGATAT GGATTTTTAC
GACAAAAATA TAGTCTTGTC AGAGTTCTAT GATGATGTTG TAAAAAAGGT GATAAGCGGC
GAAGTAGAAT TAGGGCTAAT ATTTAAAGAA TACTACGATC AATTAGACCA AGAAACCAAA
GACAGCATAA ACATCGTAAA GGAAATATCT TTGGATGCAG GTCATCACTT CTTGGTGTCA
AAAGAATTTT ATGAAACACA TCAAAATAGT ATAAAGGCTT TTATAAAAGC CTTGGAACTG
GAAGAAATCT CTGAAGAAAA CACGAATAAA CTAAAGATAT ATCAAAAATC TGGAAATATT
ATCAGAGAAT CTGTAATCCG TAGCATGCTT GTAGAAAGCT TAAAAGATAT AAACCAGGCG
ATAATATCTG CTGATACGGA AGAAGAGCTT TTTGAGCGAA TATGCCAAAA TCTTGTAAAT
AAAAGCCGTT TTAAATTTGT ATGGGTTGGG AAAAAAGAAG GAGAGTTCAT AAAACCAGTG
CATAAATGCG GTGAAGACGA TGGATATGTG GATAGTCTTA AAATAAGCGT AAGAGAAGAT
GTCCCAGAAG GGATAGGACA AACTGGCATA GCTTATAGGG AAAATAGGAT TGTTATAAAC
GAAAACACAT TAACATCAGA TCTTATGAAA GCTTGGAAAG ATGAGCTTTT AAAAAGAGAT
ATATATTCAT CGTTAGCTGT ACCTATAGAA AAAAATGGAG AAGTTTATGC GGTAATAAGC
GTTTATTCTA TTATACCGTT TTCTTTTAAA AAAGAATTTA TGACAATATT TGAAGAGCTT
AAAAAAGATG TATCTTTTGC TTTGGAGAAG ATTGATAAAG ACAAAGAAAG TATCGTTTTA
AGAAAAGCCA CAGACGATGC AAAAATGTGG CTTCTTATAA CAAGCAAAGA GGGTCTGATT
GAGTACGTCA ATCAACATGT TTTAGATTTG ACAGGTTATA AAAAAGAAGA GGTGATAGGC
AAAAGCCCAA AAATGTTTAA CTCCGAATAT CAGAGTGATA ATTTTTGCGA TGAGGTATGG
AGAACCGTTT CGTCAAACAA ACCTTTTTCT GCAATATTTG CATACAAGAC AAAAAATGAA
AATGTTATAT ACATAGATCA GACTATATAT CCAGTGGTGC TTAACGACGG AACCATGAAA
TTTTTATTCG TTGGCAAAGA CATCACCAAT GAAAAAGTAT TGAGCCAAGA GCTTGATAAA
TACAAATTTT ACGATACTCT TACCGAACTG CCAAACTTTT TAGCTTTTAA GTTTTATGTT
TCAGATGTCG TTGAAAGCAA AAGATACAAA GATTTTGCTT TGATACTTAT AGATATTTAC
AACATGTCTT TTGTTAACTC CACCTATGGG TTTGATGTGG GCAACGAAGT ACTAAAAGAG
GTAGCAAATA TCTTAAAGCA AGAGTTTAAA GAGGGATTTG TGGCAAGGAT CGGAAACGAT
GAATTTGGCA TATTTGTCCC AGATATAGAA AGTGAATCTA TTTTGATATA TAAGATTAGA
AGCCTTTTGG ATAGAAAGAT AAAAACCTCT AAAAACTATA TTAGCATATC CTACAACGTT
TCTATCGTAT TATCTGATGT TGCTAATACT GATTTTGAAG AAGTTTACAA CAACGCCGTT
GTCACCCTAA ACCTTTCTAA GAAAGAGGGT GAAAACGTTA TAAAGTTTTA TGAATCTGAG
GTAAACACAA GATTACAAGA GTATATAACG TCAGAAAATC TTGTGGAAAG AGCTTCTGAA
GAGAATTTGT TTAGGTTTTA TTTTCAACCT TATCTTAATT CAAAAGATTT GAAAATCGTA
GGTTTTGAAT CTCTTATAAG AATAGTAGAT AAAGACGGTA CTGTCTATGC ACCCTATAAA
TTTATAGATT ACCTTGAAAA TAGTAAGTAT ATCATGCATT TTGAAGAATG GGCTTTAAAA
GAGATATCTG ATAAGATAAG AATATTTAAA TCTTTAGACA AAGATATATC TATATCTTTG
AACTTATCGG CAAAAGGGAT CTTAAGCTTA CCAGATGAGG ATTTTATTGA AAAATTGGCT
TCTGTGCCTG TGGATGTTCA AGATAATTTA GTTTTAGAAA TTACAGAAAG AAACATTATA
AAAAATGTAG AAAAATCCAA AAAGATATTT AGAAGTATAA AAGAATTCAA CAAACATATT
AAAATATCAA TAGATGATTT TGGCACTGGT TATTCATCGC TGGCTTATCT AAAACACCTT
CCGATAGATA TACTTAAAAT AGATATATCT TTTATAAGAG GTATTGCAAC CGATAGGCAC
GATTTTTCCA TAGTAAAGTT TATAACCGGC TTATCCAAAG ATTTTGGTTT TAAGACTATA
GCAGAAGGCG TAGAAACAAA AGAACAAGTA GATATGCTTT CATCGATGGG AGTGGATTAT
TTTCAAGGAT TTTATTTTGC TAAACCCATG CCAGAAAATG AGGCTATAGA GTTTGTCTTG
GAGGATATGA AAAAAAGCAA ATGA
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| Protein sequence | MIEFRVCPHD TQKGLDKWLN IAKKIKEIFG QEVELKPFKN FDEEYAYFSK DDFKPDIYYA
SFDMTLLLLD KGYKIIGKFK NENDVFLLVS RKKFNDEEPS NITIVDKLNS FYVLYDMDFY
DKNIVLSEFY DDVVKKVISG EVELGLIFKE YYDQLDQETK DSINIVKEIS LDAGHHFLVS
KEFYETHQNS IKAFIKALEL EEISEENTNK LKIYQKSGNI IRESVIRSML VESLKDINQA
IISADTEEEL FERICQNLVN KSRFKFVWVG KKEGEFIKPV HKCGEDDGYV DSLKISVRED
VPEGIGQTGI AYRENRIVIN ENTLTSDLMK AWKDELLKRD IYSSLAVPIE KNGEVYAVIS
VYSIIPFSFK KEFMTIFEEL KKDVSFALEK IDKDKESIVL RKATDDAKMW LLITSKEGLI
EYVNQHVLDL TGYKKEEVIG KSPKMFNSEY QSDNFCDEVW RTVSSNKPFS AIFAYKTKNE
NVIYIDQTIY PVVLNDGTMK FLFVGKDITN EKVLSQELDK YKFYDTLTEL PNFLAFKFYV
SDVVESKRYK DFALILIDIY NMSFVNSTYG FDVGNEVLKE VANILKQEFK EGFVARIGND
EFGIFVPDIE SESILIYKIR SLLDRKIKTS KNYISISYNV SIVLSDVANT DFEEVYNNAV
VTLNLSKKEG ENVIKFYESE VNTRLQEYIT SENLVERASE ENLFRFYFQP YLNSKDLKIV
GFESLIRIVD KDGTVYAPYK FIDYLENSKY IMHFEEWALK EISDKIRIFK SLDKDISISL
NLSAKGILSL PDEDFIEKLA SVPVDVQDNL VLEITERNII KNVEKSKKIF RSIKEFNKHI
KISIDDFGTG YSSLAYLKHL PIDILKIDIS FIRGIATDRH DFSIVKFITG LSKDFGFKTI
AEGVETKEQV DMLSSMGVDY FQGFYFAKPM PENEAIEFVL EDMKKSK
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