10 homologs were found in PanDaTox collection
for query gene Gobs_0628 on replicon NC_013757
Organism: Geodermatophilus obscurus DSM 43160



Page 1 of 1    << first  < prev  1  next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013757  Gobs_0628  LamG domain protein jellyroll fold domain protein  100 
 
 
574 aa  1137    Geodermatophilus obscurus DSM 43160  Bacteria  normal  n/a   
 
 
-
 
NC_014151  Cfla_0890  PKD domain containing protein  32.31 
 
 
2066 aa  126  9e-28  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.0241772  normal 
 
 
-
 
NC_013235  Namu_4457  PKD domain containing protein  28.51 
 
 
1565 aa  114  6e-24  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_02880  PDK repeat-containing protein  39.33 
 
 
1916 aa  102  3e-20  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_0997  PKD domain containing protein  35.47 
 
 
1150 aa  93.2  1e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.014339 
 
 
-
 
NC_009664  Krad_1825  Fibronectin type III domain protein  32.34 
 
 
1009 aa  79  0.0000000000002  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0101556 
 
 
-
 
NC_007955  Mbur_1976  hypothetical protein  24.52 
 
 
1367 aa  73.2  0.00000000001  Methanococcoides burtonii DSM 6242  Archaea  unclonable  0.000800417  n/a   
 
 
-
 
NC_008578  Acel_0663  peptidase S26B, signal peptidase  27.97 
 
 
618 aa  55.8  0.000002  Acidothermus cellulolyticus 11B  Bacteria  normal  0.10738  normal 
 
 
-
 
NC_009483  Gura_3011  LamG domain-containing protein  32.02 
 
 
4761 aa  54.3  0.000006  Geobacter uraniireducens Rf4  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_5589  LamG domain protein jellyroll fold domain protein  31.1 
 
 
1292 aa  47  0.001  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
Page 1 of 1    << first  < prev  1  next >  last >>